Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN2BO60939 OR52A4P-201ENST00000472867 958 ntBASIC4.07□□□□□ -1.76
SCN2BO60939 BNIP3P41-201ENST00000503774 571 ntBASIC4.07□□□□□ -1.76
SCN2BO60939 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.07□□□□□ -1.76
SCN2BO60939 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN2BO60939 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN2BO60939 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN2BO60939 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN2BO60939 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN2BO60939 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCN2BO60939 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN2BO60939 AL354984.3-201ENST00000604803 325 ntBASIC4.07□□□□□ -1.76
SCN2BO60939 AC012409.3-201ENST00000611343 981 ntBASIC4.07□□□□□ -1.76
SCN2BO60939 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN2BO60939 AP005019.3-201ENST00000620418 560 ntBASIC4.07□□□□□ -1.76
SCN2BO60939 MIR7703-201ENST00000620784 77 ntBASIC4.07□□□□□ -1.76
SCN2BO60939 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCN2BO60939 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN2BO60939 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN2BO60939 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN2BO60939 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN2BO60939 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN2BO60939 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCN2BO60939 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SCN2BO60939 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCN2BO60939 OR56B2P-202ENST00000641377 2453 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN2BO60939 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCN2BO60939 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SCN2BO60939 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SCN2BO60939 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCN2BO60939 OR5P1P-201ENST00000299512 925 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN2BO60939 AL583835.1-201ENST00000399570 407 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 SNORA11F-201ENST00000408237 128 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.06□□□□□ -1.76
SCN2BO60939 TRIM60P17-201ENST00000415181 719 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.06□□□□□ -1.76
SCN2BO60939 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.06□□□□□ -1.76
SCN2BO60939 AC006065.1-201ENST00000422539 802 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.06□□□□□ -1.76
SCN2BO60939 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.06□□□□□ -1.76
SCN2BO60939 AC073264.2-201ENST00000448886 166 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.06□□□□□ -1.76
SCN2BO60939 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN2BO60939 MTCYBP14-201ENST00000457471 715 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 RPL21P126-201ENST00000470049 478 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 HNRNPKP5-201ENST00000515300 253 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 UBTFL9-201ENST00000534504 1148 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 AP006289.1-201ENST00000538089 277 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.06□□□□□ -1.76
SCN2BO60939 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.06□□□□□ -1.76
SCN2BO60939 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.06□□□□□ -1.76
SCN2BO60939 AC027176.2-201ENST00000559166 746 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 AC110743.1-201ENST00000584870 478 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN2BO60939 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.06□□□□□ -1.76
SCN2BO60939 AC010680.3-201ENST00000604215 520 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 AL049844.2-201ENST00000604280 628 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN2BO60939 AC008013.2-202ENST00000637965 364 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 AC009452.1-201ENST00000640823 606 ntBASIC4.06□□□□□ -1.76
SCN2BO60939 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SCN2BO60939 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SCN2BO60939 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN2BO60939 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN2BO60939 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN2BO60939 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SCN2BO60939 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN2BO60939 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SCN2BO60939 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN2BO60939 MFSD8-216ENST00000641147 4009 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.05□□□□□ -1.76
SCN2BO60939 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.05□□□□□ -1.76
SCN2BO60939 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN2BO60939 AC012020.1-201ENST00000624541 1728 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN2BO60939 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SCN2BO60939 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SCN2BO60939 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SCN2BO60939 MIR331-201ENST00000362302 94 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 RNA5SP175-201ENST00000364275 119 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN2BO60939 MIR92A2-201ENST00000385299 75 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 AL161631.1-201ENST00000417933 486 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 AC069213.2-201ENST00000420238 366 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.05□□□□□ -1.76
SCN2BO60939 RPL23AP1-201ENST00000428990 471 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN2BO60939 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN2BO60939 RN7SL585P-201ENST00000470538 280 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 RPL23AP2-201ENST00000471227 466 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN2BO60939 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
SCN2BO60939 RPL23AP72-201ENST00000492447 435 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN2BO60939 OR5AN2P-201ENST00000534535 896 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN2BO60939 AC007448.1-201ENST00000582714 234 ntBASIC4.05□□□□□ -1.76
SCN2BO60939 VN1R84P-201ENST00000593697 235 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms