Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MTND5P4-201ENST00000514978 288 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AC109635.6-201ENST00000525487 1113 ntBASIC6.45□□□□□ -1.38
SOX1O00570 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX1O00570 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 AL512360.1-201ENST00000555346 234 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.45□□□□□ -1.38
SOX1O00570 AC087477.6-201ENST00000559595 843 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX1O00570 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.45□□□□□ -1.38
SOX1O00570 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX1O00570 AC009977.1-201ENST00000586015 570 ntBASIC6.45□□□□□ -1.38
SOX1O00570 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX1O00570 AC022432.1-201ENST00000595739 310 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AC069304.2-201ENST00000605154 435 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX1O00570 AP004247.3-201ENST00000608682 624 ntBASIC6.45□□□□□ -1.38
SOX1O00570 Y_RNA.812-201ENST00000610788 101 ntBASIC6.45□□□□□ -1.38
SOX1O00570 Y_RNA.784-201ENST00000613803 101 ntBASIC6.45□□□□□ -1.38
SOX1O00570 Y_RNA.787-201ENST00000616522 101 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AC096861.1-201ENST00000616652 240 ntBASIC6.45□□□□□ -1.38
SOX1O00570 Y_RNA.780-201ENST00000617336 101 ntBASIC6.45□□□□□ -1.38
SOX1O00570 Y_RNA.801-201ENST00000619005 101 ntBASIC6.45□□□□□ -1.38
SOX1O00570 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.45□□□□□ -1.38
SOX1O00570 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX1O00570 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 AC006600.2-201ENST00000624834 2506 ntBASIC6.45□□□□□ -1.38
SOX1O00570 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.45□□□□□ -1.38
SOX1O00570 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SOX1O00570 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SOX1O00570 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SOX1O00570 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.44□□□□□ -1.38
SOX1O00570 SRRM1P3-201ENST00000426911 2678 ntBASIC6.44□□□□□ -1.38
SOX1O00570 MT-RNR2-201ENST00000387347 1559 ntBASIC6.44□□□□□ -1.38
SOX1O00570 FARSBP1-201ENST00000435808 1778 ntBASIC6.44□□□□□ -1.38
SOX1O00570 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX1O00570 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX1O00570 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX1O00570 AL031651.1-201ENST00000615357 1438 ntBASIC6.44□□□□□ -1.38
SOX1O00570 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX1O00570 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SOX1O00570 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX1O00570 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SOX1O00570 SNORD56.2-201ENST00000363242 71 ntBASIC6.44□□□□□ -1.38
SOX1O00570 Y_RNA.142-201ENST00000363491 102 ntBASIC6.44□□□□□ -1.38
SOX1O00570 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX1O00570 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SOX1O00570 RPS3AP36-201ENST00000398190 775 ntBASIC6.44□□□□□ -1.38
SOX1O00570 MIR1303-201ENST00000408625 86 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AC004690.1-201ENST00000418216 328 ntBASIC6.44□□□□□ -1.38
SOX1O00570 RPL36P18-201ENST00000419316 318 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.44□□□□□ -1.38
SOX1O00570 NME1P1-201ENST00000420914 382 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AL953862.1-201ENST00000423016 168 ntBASIC6.44□□□□□ -1.38
SOX1O00570 USP9YP9-201ENST00000429406 715 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AC005534.2-201ENST00000431047 433 ntBASIC6.44□□□□□ -1.38
SOX1O00570 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
SOX1O00570 ARPC3P1-201ENST00000437218 533 ntBASIC6.44□□□□□ -1.38
SOX1O00570 RPL7P11-201ENST00000437586 658 ntBASIC6.44□□□□□ -1.38
SOX1O00570 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX1O00570 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.44□□□□□ -1.38
SOX1O00570 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX1O00570 AC093166.4-201ENST00000457867 318 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AC023598.1-201ENST00000472521 361 ntBASIC6.44□□□□□ -1.38
SOX1O00570 RPS18P6-201ENST00000476880 458 ntBASIC6.44□□□□□ -1.38
SOX1O00570 ACTR3P3-201ENST00000480448 893 ntBASIC6.44□□□□□ -1.38
SOX1O00570 RN7SL459P-201ENST00000481078 302 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AC068587.1-201ENST00000483613 781 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AC114981.1-201ENST00000503897 678 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX1O00570 AC112225.1-201ENST00000508230 297 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX1O00570 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX1O00570 AC134698.5-201ENST00000519444 336 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AL049779.2-201ENST00000553847 315 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX1O00570 AC018558.5-201ENST00000565840 952 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AC015720.2-201ENST00000567709 334 ntBASIC6.44□□□□□ -1.38
SOX1O00570 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.44□□□□□ -1.38
SOX1O00570 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.44□□□□□ -1.38
SOX1O00570 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.44□□□□□ -1.38
SOX1O00570 MIR4795-201ENST00000584182 89 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.44□□□□□ -1.38
SOX1O00570 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.44□□□□□ -1.38
SOX1O00570 AC087283.1-201ENST00000604029 1074 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AL162730.1-201ENST00000605734 292 ntBASIC6.44□□□□□ -1.38
SOX1O00570 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC6.44□□□□□ -1.38
SOX1O00570 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.44□□□□□ -1.38
SOX1O00570 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SOX1O00570 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SOX1O00570 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SOX1O00570 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.44□□□□□ -1.38
SOX1O00570 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SOX1O00570 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms