Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC188H7C350 AC007546.2-201ENST00000623996 360 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 AC087190.4-201ENST00000574616 8334 ntBASIC4.71□□□□□ -1.66
CCDC188H7C350 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
CCDC188H7C350 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC188H7C350 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC188H7C350 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC188H7C350 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC188H7C350 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CCDC188H7C350 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC188H7C350 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC188H7C350 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC188H7C350 LINC00622-201ENST00000562811 1570 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC188H7C350 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC188H7C350 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC188H7C350 AC011266.1-201ENST00000624119 3569 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
CCDC188H7C350 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC188H7C350 OR52E6-202ENST00000379946 954 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 RNU1-106P-201ENST00000384382 164 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC188H7C350 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC188H7C350 RN7SKP278-201ENST00000410504 342 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 RNA5SP104-201ENST00000410989 118 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC188H7C350 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC188H7C350 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC188H7C350 AC019050.1-201ENST00000418508 492 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC188H7C350 AL606495.1-201ENST00000422100 813 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 BX510359.3-201ENST00000422168 306 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 AL158073.1-201ENST00000426848 1104 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 AC007559.1-201ENST00000428736 355 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 MTCO1P43-201ENST00000431831 488 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 AL450263.2-201ENST00000439400 589 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 AC069285.2-201ENST00000440210 275 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 AC092647.3-201ENST00000443044 633 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 MOB1AP2-201ENST00000446060 614 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 MTND2P8-201ENST00000450555 1025 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC188H7C350 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC188H7C350 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC188H7C350 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC188H7C350 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC188H7C350 AC010285.3-201ENST00000511668 676 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC188H7C350 RNU6-334P-201ENST00000517072 102 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC188H7C350 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC188H7C350 IGKV2-36-201ENST00000519999 223 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC188H7C350 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC188H7C350 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC188H7C350 OR5AK3P-201ENST00000527486 1297 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC188H7C350 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC188H7C350 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC188H7C350 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC188H7C350 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC188H7C350 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC188H7C350 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC188H7C350 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC188H7C350 AL121594.4-201ENST00000556211 1196 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC188H7C350 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC188H7C350 AC026741.1-201ENST00000605892 482 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 AC243654.2-201ENST00000612843 443 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.7□□□□□ -1.66
CCDC188H7C350 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC188H7C350 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC188H7C350 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC188H7C350 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC188H7C350 AC114546.3-201ENST00000623582 1734 ntBASIC4.69□□□□□ -1.66
CCDC188H7C350 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC188H7C350 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CCDC188H7C350 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC188H7C350 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CCDC188H7C350 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC188H7C350 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC188H7C350 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC188H7C350 KARSP3-201ENST00000571212 1504 ntBASIC4.69□□□□□ -1.66
CCDC188H7C350 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC188H7C350 RNU6-98P-201ENST00000384173 107 ntBASIC4.69□□□□□ -1.66
CCDC188H7C350 SDHCP2-201ENST00000398565 501 ntBASIC4.69□□□□□ -1.66
CCDC188H7C350 RPS24P12-201ENST00000402084 394 ntBASIC4.69□□□□□ -1.66
CCDC188H7C350 AC234782.4-201ENST00000417646 1048 ntBASIC4.69□□□□□ -1.66
CCDC188H7C350 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC188H7C350 AC023128.2-201ENST00000420880 1223 ntBASIC4.69□□□□□ -1.66
CCDC188H7C350 PRELID3BP10-201ENST00000431957 584 ntBASIC4.69□□□□□ -1.66
CCDC188H7C350 NRBF2P3-201ENST00000432731 865 ntBASIC4.69□□□□□ -1.66
CCDC188H7C350 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC188H7C350 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC188H7C350 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC188H7C350 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC188H7C350 AC079804.1-201ENST00000461922 436 ntBASIC4.69□□□□□ -1.66
CCDC188H7C350 TRBV8-2-201ENST00000475637 270 ntBASIC4.69□□□□□ -1.66
CCDC188H7C350 PARP4P3-201ENST00000510265 317 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms