Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHGA1Q9Y5H4 AC087190.4-201ENST00000574616 8334 ntBASIC4.65□□□□□ -1.66
PCDHGA1Q9Y5H4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHGA1Q9Y5H4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHGA1Q9Y5H4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.66
PCDHGA1Q9Y5H4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHGA1Q9Y5H4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PCDHGA1Q9Y5H4 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHGA1Q9Y5H4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHGA1Q9Y5H4 AC104623.2-202ENST00000623477 4002 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC007618.1-201ENST00000366455 732 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AL035079.1-201ENST00000405210 287 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 UQCRBP1-201ENST00000421129 336 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 ARL2BPP3-201ENST00000421226 480 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 GAPDHP49-201ENST00000421421 961 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 MTND2P11-201ENST00000423638 648 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC073508.1-201ENST00000428866 656 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 MTND2P8-201ENST00000450555 1025 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 RPS20P4-201ENST00000461659 355 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC091153.1-201ENST00000466297 402 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC010618.1-201ENST00000469924 477 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC108729.2-201ENST00000476543 840 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC093824.1-201ENST00000508796 343 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 RNU6-467P-201ENST00000517027 110 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC138701.1-201ENST00000524329 714 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC027369.5-201ENST00000533838 755 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC093014.1-201ENST00000548926 724 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 MTCYBP13-201ENST00000578634 1093 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC069061.3-201ENST00000582254 823 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 NF1P5-201ENST00000588287 448 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 RPL21P136-201ENST00000605378 396 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AL121932.1-201ENST00000605542 214 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC108359.1-201ENST00000616451 1211 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 U6.48-201ENST00000618523 106 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AP006248.2-201ENST00000623309 592 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AP006248.3-201ENST00000623580 594 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 OR52H1-202ENST00000641796 1061 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC022031.1-201ENST00000585985 2593 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AL731532.2-201ENST00000623542 1953 ntBASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA1Q9Y5H4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 RNA5SP388-201ENST00000362584 119 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 Y_RNA.110-201ENST00000363220 99 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 SNORA57.1-201ENST00000391227 145 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 RN7SKP267-201ENST00000410381 285 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 PTP4A1P3-201ENST00000433661 420 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 AC000111.2-201ENST00000448200 210 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 AL162388.1-201ENST00000450912 352 ntBASIC4.64□□□□□ -1.67
PCDHGA1Q9Y5H4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms