Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RNU11-4P-201ENST00000391149 133 ntBASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 Z95327.1-201ENST00000446082 482 ntBASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 SAP18P1-201ENST00000512058 390 ntBASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 AP005212.4-201ENST00000614206 710 ntBASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NPC1L1Q9UHC9 USP9YP4-201ENST00000424401 1745 ntBASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 RN7SKP224-201ENST00000364140 325 ntBASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 CASKP1-201ENST00000412870 582 ntBASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 AL358472.1-201ENST00000431295 329 ntBASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 RN7SL585P-201ENST00000470538 280 ntBASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 AC022034.3-201ENST00000471393 478 ntBASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 RFPL4AP5-201ENST00000514977 504 ntBASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 RNU7-143P-201ENST00000516781 65 ntBASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 AC055839.1-201ENST00000634467 498 ntBASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
NPC1L1Q9UHC9 AC097504.1-201ENST00000515103 2415 ntBASIC5.59□□□□□ -1.52
NPC1L1Q9UHC9 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.59□□□□□ -1.52
NPC1L1Q9UHC9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.59□□□□□ -1.52
NPC1L1Q9UHC9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 AC007068.1-201ENST00000396690 844 ntBASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 AC006130.2-201ENST00000586202 326 ntBASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 AC022916.3-201ENST00000592961 742 ntBASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 AC092435.4-201ENST00000623012 4159 ntBASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 AC092111.2-201ENST00000611627 1414 ntBASIC5.58□□□□□ -1.52
NPC1L1Q9UHC9 AC011503.2-201ENST00000594230 1500 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 OR11H4-201ENST00000315409 1082 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 SNORA60-201ENST00000362396 134 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 RNA5SP130-201ENST00000364431 114 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 AP000357.1-201ENST00000409926 1165 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 OR52Y1P-201ENST00000452418 828 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 RPL38P1-201ENST00000460914 211 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 AC091544.1-201ENST00000484702 348 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 AP000926.3-201ENST00000497201 299 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 RNU6-943P-201ENST00000516960 98 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 YPEL5P3-201ENST00000547227 352 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 AC022968.1-201ENST00000567372 442 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 SNX18P1Y-201ENST00000616231 511 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 OR8B1P-202ENST00000641132 1178 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 AL929601.4-201ENST00000613011 1341 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms