Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AC007068.1-201ENST00000396690 844 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AL159987.2-201ENST00000432754 307 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 RNU1-95P-201ENST00000516357 160 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 RNU1-128P-201ENST00000516704 160 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AC100770.1-201ENST00000532310 322 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AC068993.1-201ENST00000546724 589 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AC107993.1-201ENST00000591343 684 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 U3.45-201ENST00000607547 219 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 SNORD91B-202ENST00000608459 222 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 AC005344.1-201ENST00000613391 459 ntBASIC5.41□□□□□ -1.54
PHRF1Q9P1Y6 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PHRF1Q9P1Y6 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
PHRF1Q9P1Y6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PHRF1Q9P1Y6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PHRF1Q9P1Y6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PHRF1Q9P1Y6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.4□□□□□ -1.54
PHRF1Q9P1Y6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PHRF1Q9P1Y6 LINC00561-201ENST00000565815 2738 ntBASIC5.4□□□□□ -1.54
PHRF1Q9P1Y6 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 AC005412.1-201ENST00000580812 1049 ntBASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 AL442067.2-201ENST00000614033 363 ntBASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 AL138721.1-201ENST00000616756 179 ntBASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PHRF1Q9P1Y6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 ZNF962P-201ENST00000443465 3140 ntBASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 AC058791.1-201ENST00000608412 3198 ntBASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 RNA5SP97-201ENST00000365006 84 ntBASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 PLGLA-201ENST00000465668 449 ntBASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 NDUFA5P2-201ENST00000519723 344 ntBASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PHRF1Q9P1Y6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 AL161631.1-201ENST00000417933 486 ntBASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 FTH1P25-201ENST00000447665 469 ntBASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 AL451050.1-201ENST00000450126 415 ntBASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 PPIAP15-201ENST00000479662 484 ntBASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 UBE2CP3-201ENST00000502715 450 ntBASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 OR5M7P-201ENST00000526140 972 ntBASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 AC022968.1-201ENST00000567372 442 ntBASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 ZNF415P1-201ENST00000582279 1166 ntBASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 SLC25A36P1-201ENST00000590111 465 ntBASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 AL159169.3-201ENST00000608871 561 ntBASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 AC073346.2-201ENST00000624724 2058 ntBASIC5.38□□□□□ -1.55
PHRF1Q9P1Y6 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms