Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC9.19□□□□□ -0.94
PROM2Q8N271 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
PROM2Q8N271 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC9.19□□□□□ -0.94
PROM2Q8N271 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PROM2Q8N271 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC9.19□□□□□ -0.94
PROM2Q8N271 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PROM2Q8N271 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC9.19□□□□□ -0.94
PROM2Q8N271 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
PROM2Q8N271 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC9.19□□□□□ -0.94
PROM2Q8N271 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC9.19□□□□□ -0.94
PROM2Q8N271 RNU6-1093P-201ENST00000391194 107 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC9.19□□□□□ -0.94
PROM2Q8N271 AL593856.1-201ENST00000419949 805 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 AL606753.1-201ENST00000427435 87 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC9.19□□□□□ -0.94
PROM2Q8N271 RPL23AP69-201ENST00000431134 458 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 AC096775.1-201ENST00000437724 448 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC9.19□□□□□ -0.94
PROM2Q8N271 AP002812.1-201ENST00000495378 474 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 RPL24-206ENST00000495401 478 ntTSL 2 BASIC9.19□□□□□ -0.94
PROM2Q8N271 RPL23AP55-201ENST00000498163 452 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC9.19□□□□□ -0.94
PROM2Q8N271 AC020893.1-201ENST00000502452 580 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 HSD3BP3-201ENST00000514706 994 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PROM2Q8N271 IL7-206ENST00000520269 456 ntTSL 3 BASIC9.19□□□□□ -0.94
PROM2Q8N271 FAM60DP-201ENST00000524174 632 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 RPA2P3-201ENST00000533268 770 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 AP001858.2-201ENST00000536213 601 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 DPPA3P2-201ENST00000553589 478 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC9.19□□□□□ -0.94
PROM2Q8N271 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PROM2Q8N271 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PROM2Q8N271 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC9.19□□□□□ -0.94
PROM2Q8N271 AC127459.1-201ENST00000563129 2768 ntBASIC9.19□□□□□ -0.94
PROM2Q8N271 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC9.19□□□□□ -0.94
PROM2Q8N271 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PROM2Q8N271 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
PROM2Q8N271 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
PROM2Q8N271 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PROM2Q8N271 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
PROM2Q8N271 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PROM2Q8N271 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PROM2Q8N271 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
PROM2Q8N271 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PROM2Q8N271 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PROM2Q8N271 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
PROM2Q8N271 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
PROM2Q8N271 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PROM2Q8N271 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC9.18□□□□□ -0.94
PROM2Q8N271 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
PROM2Q8N271 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
PROM2Q8N271 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PROM2Q8N271 Y_RNA.29-201ENST00000362570 113 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 Y_RNA.376-201ENST00000365638 108 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 Y_RNA.562-201ENST00000384695 113 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 U3.25-201ENST00000391209 220 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 HIGD1AP11-201ENST00000438361 280 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 NEFMP1-201ENST00000443423 1006 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC9.18□□□□□ -0.94
PROM2Q8N271 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PROM2Q8N271 AC117395.2-201ENST00000463122 1128 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 RN7SL221P-201ENST00000466190 281 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC9.18□□□□□ -0.94
PROM2Q8N271 AC112484.3-201ENST00000505910 329 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 HMGN1P16-201ENST00000508308 283 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 AC021146.3-201ENST00000511911 260 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC9.18□□□□□ -0.94
PROM2Q8N271 SNX29P2-204ENST00000603801 875 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 AL596245.1-201ENST00000618994 362 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 AC245060.6-201ENST00000624350 8420 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC9.18□□□□□ -0.94
PROM2Q8N271 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC9.18□□□□□ -0.94
PROM2Q8N271 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PROM2Q8N271 AC078795.1-201ENST00000602342 3143 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 MAPK10-285ENST00000641207 2746 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 LRRC37A6P-202ENST00000448648 5444 ntBASIC9.18□□□□□ -0.94
PROM2Q8N271 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC9.17□□□□□ -0.94
PROM2Q8N271 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PROM2Q8N271 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PROM2Q8N271 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC9.17□□□□□ -0.94
PROM2Q8N271 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PROM2Q8N271 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC9.17□□□□□ -0.94
PROM2Q8N271 MIR137HG-205ENST00000634594 3586 ntTSL 5 BASIC9.17□□□□□ -0.94
PROM2Q8N271 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
PROM2Q8N271 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC9.17□□□□□ -0.94
PROM2Q8N271 KARSP2-201ENST00000415696 1639 ntBASIC9.17□□□□□ -0.94
PROM2Q8N271 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PROM2Q8N271 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PROM2Q8N271 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC9.17□□□□□ -0.94
PROM2Q8N271 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PROM2Q8N271 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
PROM2Q8N271 GPI-202ENST00000415930 4000 ntTSL 2 BASIC9.17□□□□□ -0.94
PROM2Q8N271 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PROM2Q8N271 Y_RNA.222-201ENST00000364264 102 ntBASIC9.17□□□□□ -0.94
PROM2Q8N271 RN7SKP78-201ENST00000364711 318 ntBASIC9.17□□□□□ -0.94
PROM2Q8N271 SNORA24.1-201ENST00000384401 135 ntBASIC9.17□□□□□ -0.94
PROM2Q8N271 RNU6-55P-201ENST00000411092 107 ntBASIC9.17□□□□□ -0.94
PROM2Q8N271 RPL30P2-201ENST00000414021 291 ntBASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms