Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 AC097504.1-201ENST00000515103 2415 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
VARS2Q5ST30 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
VARS2Q5ST30 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC025125.1-201ENST00000624743 1922 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 MFSD8-218ENST00000641186 4448 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 AL512662.1-201ENST00000624850 2251 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 AL049634.1-201ENST00000453770 1720 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 AL031985.1-201ENST00000392713 418 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC092651.1-201ENST00000426110 312 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 HSPE1P16-201ENST00000426640 348 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC091286.1-201ENST00000431233 461 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 AL118520.1-201ENST00000450770 291 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 MTCO3P8-201ENST00000453691 755 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC019084.1-201ENST00000457337 432 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 LINC01399-202ENST00000458450 244 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 SNRPCP11-201ENST00000492453 205 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC083829.1-201ENST00000503756 657 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC008716.1-201ENST00000511084 513 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 SNORA31.18-201ENST00000517043 134 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 MTND5P41-201ENST00000517498 206 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 CBX3P8-201ENST00000532412 525 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 AL356432.3-201ENST00000568952 465 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC090517.1-201ENST00000569307 266 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC091932.1-201ENST00000569381 427 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 AL031777.2-201ENST00000611953 196 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 LDHA-225ENST00000625635 141 ntTSL 5 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
VARS2Q5ST30 GTF2H2B-203ENST00000508065 1432 ntBASIC7.76□□□□□ -1.17
VARS2Q5ST30 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
VARS2Q5ST30 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 AL590065.1-201ENST00000603371 4774 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 CASC19-260ENST00000641828 2001 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
VARS2Q5ST30 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 RNU6-562P-201ENST00000362731 107 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 Y_RNA.353-201ENST00000365440 108 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 RNU6-98P-201ENST00000384173 107 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 RNU2-25P-201ENST00000411041 191 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 AL022100.1-202ENST00000421214 548 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 RPS3AP12-201ENST00000443616 753 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC005297.2-201ENST00000450430 606 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 RNU7-182P-201ENST00000459009 62 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 MYL6P4-201ENST00000477911 453 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC044810.1-201ENST00000480271 711 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC022415.1-202ENST00000486612 523 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 TECRP2-201ENST00000503270 928 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 PSMA2P2-201ENST00000504319 686 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC021146.3-201ENST00000511911 260 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.75□□□□□ -1.17
VARS2Q5ST30 SNORA31.6-201ENST00000516241 130 ntBASIC7.75□□□□□ -1.17
VARS2Q5ST30 SCARNA11.1-201ENST00000516918 132 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms