Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC124068.1-201ENST00000563131 678 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SCN1BQ07699 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AC004948.1-201ENST00000609858 672 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 AC079395.2-201ENST00000610982 737 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN1BQ07699 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.37□□□□□ -1.71
SCN1BQ07699 AP000943.4-201ENST00000622912 357 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 AP002505.2-201ENST00000623585 696 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 AC093875.1-201ENST00000623688 504 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.37□□□□□ -1.71
SCN1BQ07699 SNORA17.5-201ENST00000630429 132 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 AC135068.12-201ENST00000637370 931 ntBASIC4.37□□□□□ -1.71
SCN1BQ07699 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SCN1BQ07699 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN1BQ07699 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.37□□□□□ -1.71
SCN1BQ07699 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SCN1BQ07699 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN1BQ07699 AL592494.2-201ENST00000425455 1548 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SCN1BQ07699 AC017104.4-201ENST00000636283 1592 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN1BQ07699 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN1BQ07699 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SCN1BQ07699 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SCN1BQ07699 RNU6-207P-201ENST00000384137 107 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 SNORA67-201ENST00000384423 137 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 RNA5SP339-201ENST00000390987 122 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 HSPD1P16-201ENST00000402302 394 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 HMGB3P19-201ENST00000403971 560 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SCN1BQ07699 RN7SKP293-201ENST00000411389 296 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.36□□□□□ -1.71
SCN1BQ07699 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.36□□□□□ -1.71
SCN1BQ07699 QRSL1P2-201ENST00000418582 964 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN1BQ07699 ELOCP6-201ENST00000429066 328 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 MRPL50P1-201ENST00000431951 384 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.36□□□□□ -1.71
SCN1BQ07699 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.36□□□□□ -1.71
SCN1BQ07699 OR51B8P-201ENST00000449892 769 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.36□□□□□ -1.71
SCN1BQ07699 ELOCP12-201ENST00000458706 328 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 AC023141.9-201ENST00000458734 412 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 AC113430.1-201ENST00000506872 718 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 RNU6-416P-201ENST00000516265 103 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 RNA5SP392-201ENST00000516905 112 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 RN7SKP234-201ENST00000517173 224 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.36□□□□□ -1.71
SCN1BQ07699 MTND2P26-201ENST00000528255 1029 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 AC124293.1-201ENST00000530034 493 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.36□□□□□ -1.71
SCN1BQ07699 CYCSP28-201ENST00000534284 321 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.36□□□□□ -1.71
SCN1BQ07699 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN1BQ07699 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN1BQ07699 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.36□□□□□ -1.71
SCN1BQ07699 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN1BQ07699 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN1BQ07699 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.36□□□□□ -1.71
SCN1BQ07699 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN1BQ07699 AL353726.1-201ENST00000614041 1000 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 AL035461.2-201ENST00000619201 524 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SCN1BQ07699 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN1BQ07699 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN1BQ07699 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN1BQ07699 AC136428.4-201ENST00000634254 1155 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SCN1BQ07699 AC138393.1-206ENST00000540997 1886 ntBASIC4.36□□□□□ -1.71
SCN1BQ07699 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN1BQ07699 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN1BQ07699 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN1BQ07699 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN1BQ07699 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.36□□□□□ -1.71
SCN1BQ07699 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SCN1BQ07699 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SCN1BQ07699 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
SCN1BQ07699 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SCN1BQ07699 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN1BQ07699 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN1BQ07699 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SCN1BQ07699 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SCN1BQ07699 U3.15-201ENST00000365398 212 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 GCNT6-201ENST00000379591 934 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SCN1BQ07699 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SCN1BQ07699 AL160275.2-201ENST00000412010 394 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 AL450992.3-201ENST00000413192 568 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 PAICSP7-201ENST00000419829 962 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 OR4F13P-201ENST00000428478 931 ntBASIC4.35□□□□□ -1.71
SCN1BQ07699 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN1BQ07699 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN1BQ07699 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.35□□□□□ -1.71
SCN1BQ07699 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN1BQ07699 HMGN1P5-201ENST00000448591 263 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms