Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC2.45□□□□□ -2.02
HSPG2P98160 AP000542.2-201ENST00000623199 6179 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC2.45□□□□□ -2.02
HSPG2P98160 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 CA1-225ENST00000626824 2405 ntTSL 5 BASIC2.45□□□□□ -2.02
HSPG2P98160 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 RPL23AP46-201ENST00000438548 490 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC2.45□□□□□ -2.02
HSPG2P98160 AL831737.1-201ENST00000441288 271 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC2.45□□□□□ -2.02
HSPG2P98160 AC022655.2-201ENST00000577280 318 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.45□□□□□ -2.02
HSPG2P98160 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC2.45□□□□□ -2.02
HSPG2P98160 AC125494.3-201ENST00000602759 455 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 TUG1_1.1-201ENST00000610654 145 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AC097461.1-201ENST00000568928 2821 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 GHR-202ENST00000357703 4316 ntTSL 5 BASIC2.45□□□□□ -2.02
HSPG2P98160 GHR-213ENST00000622294 4312 ntTSL 5 BASIC2.45□□□□□ -2.02
HSPG2P98160 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC2.45□□□□□ -2.02
HSPG2P98160 AC119744.1-201ENST00000454746 1715 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HSPG2P98160 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
HSPG2P98160 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HSPG2P98160 XGY1-201ENST00000381172 446 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AC009963.4-201ENST00000448535 339 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AC004924.1-201ENST00000480160 781 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AC080014.1-201ENST00000496877 1201 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 TRAPPC2P2-201ENST00000517589 409 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AC091516.1-201ENST00000549191 703 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.45□□□□□ -2.02
HSPG2P98160 AL031658.2-201ENST00000616850 651 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 AP000648.2-201ENST00000624182 404 ntBASIC2.45□□□□□ -2.02
HSPG2P98160 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
HSPG2P98160 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HSPG2P98160 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HSPG2P98160 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC2.44□□□□□ -2.02
HSPG2P98160 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC2.44□□□□□ -2.02
HSPG2P98160 RPL7P1-201ENST00000468161 747 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.44□□□□□ -2.02
HSPG2P98160 CR383656.14-201ENST00000551951 406 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 DPPA3P2-201ENST00000553589 478 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.44□□□□□ -2.02
HSPG2P98160 AC130352.1-201ENST00000602979 661 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.44□□□□□ -2.02
HSPG2P98160 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HSPG2P98160 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.44□□□□□ -2.02
HSPG2P98160 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HSPG2P98160 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
HSPG2P98160 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 CDY11P-201ENST00000447168 1651 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 FAP-203ENST00000443424 2598 ntTSL 2 BASIC2.44□□□□□ -2.02
HSPG2P98160 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC2.44□□□□□ -2.02
HSPG2P98160 ARF4P3-201ENST00000397387 509 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 RNA5SP306-201ENST00000411087 107 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.44□□□□□ -2.02
HSPG2P98160 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.44□□□□□ -2.02
HSPG2P98160 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.44□□□□□ -2.02
HSPG2P98160 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC2.44□□□□□ -2.02
HSPG2P98160 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HSPG2P98160 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 AL033543.1-201ENST00000623440 13454 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 RPL23AP57-201ENST00000332361 466 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 SNORD17-201ENST00000390930 237 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 TMED11P-201ENST00000479478 690 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC2.44□□□□□ -2.02
HSPG2P98160 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.44□□□□□ -2.02
HSPG2P98160 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC2.44□□□□□ -2.02
HSPG2P98160 MIR432-201ENST00000606207 94 ntBASIC2.44□□□□□ -2.02
HSPG2P98160 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HSPG2P98160 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
HSPG2P98160 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HSPG2P98160 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms