Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX6-1P78426 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
NKX6-1P78426 AC239868.2-201ENST00000564237 4527 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AC019322.1-201ENST00000571869 389 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX6-1P78426 MIR1269B-201ENST00000580405 75 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.1□□□□□ -1.59
NKX6-1P78426 AC025857.2-201ENST00000602711 238 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.1□□□□□ -1.59
NKX6-1P78426 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX6-1P78426 AC037198.3-201ENST00000616754 526 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AC118658.2-201ENST00000618697 459 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AL031667.3-201ENST00000620124 655 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX6-1P78426 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.1□□□□□ -1.59
NKX6-1P78426 CASC19-222ENST00000641321 1173 ntBASIC5.1□□□□□ -1.59
NKX6-1P78426 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
NKX6-1P78426 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NKX6-1P78426 AC133552.1-201ENST00000569988 4007 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
NKX6-1P78426 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX6-1P78426 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX6-1P78426 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX6-1P78426 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.09□□□□□ -1.59
NKX6-1P78426 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
NKX6-1P78426 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX6-1P78426 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
NKX6-1P78426 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NKX6-1P78426 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
NKX6-1P78426 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 AL589647.1-201ENST00000402485 466 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 AC009237.2-201ENST00000421358 284 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NKX6-1P78426 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX6-1P78426 RPS12P17-201ENST00000438591 377 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.09□□□□□ -1.59
NKX6-1P78426 MTND2P20-201ENST00000440805 661 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 RPS23P9-201ENST00000448848 438 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 AC239809.1-201ENST00000450470 217 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 TPTE2P5-203ENST00000458118 728 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 PPIAP21-201ENST00000464473 501 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 CCDC75P1-201ENST00000469247 791 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 AC069304.1-201ENST00000491593 704 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 AC080014.1-201ENST00000496877 1201 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 HSPE1P23-201ENST00000509838 286 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 KRT19P6-201ENST00000510983 209 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX6-1P78426 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.09□□□□□ -1.59
NKX6-1P78426 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.09□□□□□ -1.59
NKX6-1P78426 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 AL049779.3-201ENST00000557141 606 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX6-1P78426 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX6-1P78426 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.09□□□□□ -1.59
NKX6-1P78426 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.09□□□□□ -1.59
NKX6-1P78426 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 AC145423.1-201ENST00000605712 336 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 AL355974.3-201ENST00000617383 467 ntBASIC5.09□□□□□ -1.59
NKX6-1P78426 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NKX6-1P78426 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.09□□□□□ -1.59
NKX6-1P78426 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NKX6-1P78426 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
NKX6-1P78426 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NKX6-1P78426 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
NKX6-1P78426 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX6-1P78426 PARP4P2-201ENST00000446672 3326 ntBASIC5.08□□□□□ -1.6
NKX6-1P78426 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
NKX6-1P78426 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.08□□□□□ -1.6
NKX6-1P78426 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX6-1P78426 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX6-1P78426 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NKX6-1P78426 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NKX6-1P78426 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.08□□□□□ -1.6
NKX6-1P78426 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.08□□□□□ -1.6
NKX6-1P78426 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NKX6-1P78426 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NKX6-1P78426 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.08□□□□□ -1.6
NKX6-1P78426 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.08□□□□□ -1.6
NKX6-1P78426 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NKX6-1P78426 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NKX6-1P78426 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms