Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.25□□□□□ -1.73
BRCA2P51587 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.25□□□□□ -1.73
BRCA2P51587 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BRCA2P51587 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.25□□□□□ -1.73
BRCA2P51587 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BRCA2P51587 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
BRCA2P51587 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.25□□□□□ -1.73
BRCA2P51587 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
BRCA2P51587 AL080315.1-201ENST00000406055 466 ntBASIC4.25□□□□□ -1.73
BRCA2P51587 RBMY1KP-201ENST00000423480 476 ntBASIC4.25□□□□□ -1.73
BRCA2P51587 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.25□□□□□ -1.73
BRCA2P51587 AC080014.1-201ENST00000496877 1201 ntBASIC4.25□□□□□ -1.73
BRCA2P51587 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.25□□□□□ -1.73
BRCA2P51587 AC025627.2-201ENST00000576220 160 ntBASIC4.25□□□□□ -1.73
BRCA2P51587 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC4.25□□□□□ -1.73
BRCA2P51587 AC006023.1-201ENST00000603944 259 ntBASIC4.25□□□□□ -1.73
BRCA2P51587 AC138932.5-201ENST00000617759 563 ntBASIC4.25□□□□□ -1.73
BRCA2P51587 SCARNA15-201ENST00000607520 4325 ntBASIC4.25□□□□□ -1.73
BRCA2P51587 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.25□□□□□ -1.73
BRCA2P51587 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.25□□□□□ -1.73
BRCA2P51587 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
BRCA2P51587 MR1-209ENST00000617803 7584 ntTSL 5 BASIC4.24□□□□□ -1.73
BRCA2P51587 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
BRCA2P51587 XGY1-201ENST00000381172 446 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.24□□□□□ -1.73
BRCA2P51587 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.24□□□□□ -1.73
BRCA2P51587 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC4.24□□□□□ -1.73
BRCA2P51587 AC133552.5-201ENST00000604266 540 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 AC138907.10-201ENST00000623708 983 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 FRG1EP-201ENST00000634469 770 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 AC244258.1-201ENST00000637553 1071 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 AC011755.1-201ENST00000623763 2049 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
BRCA2P51587 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BRCA2P51587 HMGN1P11-201ENST00000508668 303 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BRCA2P51587 RNU6-237P-201ENST00000515985 71 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BRCA2P51587 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
BRCA2P51587 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.24□□□□□ -1.73
BRCA2P51587 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BRCA2P51587 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
BRCA2P51587 SNORA38.1-201ENST00000364172 131 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.24□□□□□ -1.73
BRCA2P51587 AC079809.1-201ENST00000415468 276 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 MTND6P32-201ENST00000457611 483 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 RPL21P10-201ENST00000463521 490 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.24□□□□□ -1.73
BRCA2P51587 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.24□□□□□ -1.73
BRCA2P51587 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
BRCA2P51587 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
BRCA2P51587 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
BRCA2P51587 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
BRCA2P51587 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
BRCA2P51587 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRCA2P51587 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.23□□□□□ -1.73
BRCA2P51587 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRCA2P51587 RNA5SP97-201ENST00000365006 84 ntBASIC4.23□□□□□ -1.73
BRCA2P51587 ARF4P3-201ENST00000397387 509 ntBASIC4.23□□□□□ -1.73
BRCA2P51587 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BRCA2P51587 AC022695.1-201ENST00000522089 237 ntBASIC4.23□□□□□ -1.73
BRCA2P51587 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.23□□□□□ -1.73
BRCA2P51587 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.23□□□□□ -1.73
BRCA2P51587 NOL8P1-201ENST00000508336 3529 ntBASIC4.23□□□□□ -1.73
BRCA2P51587 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.23□□□□□ -1.73
BRCA2P51587 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.23□□□□□ -1.73
BRCA2P51587 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRCA2P51587 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
BRCA2P51587 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRCA2P51587 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.23□□□□□ -1.73
BRCA2P51587 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
BRCA2P51587 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.23□□□□□ -1.73
BRCA2P51587 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.23□□□□□ -1.73
BRCA2P51587 AC008065.1-201ENST00000428525 348 ntBASIC4.23□□□□□ -1.73
BRCA2P51587 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BRCA2P51587 RSL24D1P3-201ENST00000449255 495 ntBASIC4.23□□□□□ -1.73
BRCA2P51587 RBMY2UP-201ENST00000453474 324 ntBASIC4.23□□□□□ -1.73
BRCA2P51587 RFPL4AP5-201ENST00000514977 504 ntBASIC4.23□□□□□ -1.73
BRCA2P51587 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BRCA2P51587 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.23□□□□□ -1.73
BRCA2P51587 AC068733.2-201ENST00000605434 1418 ntBASIC4.23□□□□□ -1.73
BRCA2P51587 RN7SKP186-201ENST00000365371 303 ntBASIC4.23□□□□□ -1.73
BRCA2P51587 UBE2V1P1-201ENST00000430836 445 ntBASIC4.23□□□□□ -1.73
BRCA2P51587 PTGES3P3-201ENST00000511479 482 ntBASIC4.23□□□□□ -1.73
BRCA2P51587 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BRCA2P51587 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRCA2P51587 AC068870.3-201ENST00000625077 2536 ntBASIC4.22□□□□□ -1.73
BRCA2P51587 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRCA2P51587 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
BRCA2P51587 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
BRCA2P51587 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
BRCA2P51587 RNU1-44P-201ENST00000384453 163 ntBASIC4.22□□□□□ -1.73
BRCA2P51587 SNORD66.1-201ENST00000391230 76 ntBASIC4.22□□□□□ -1.73
BRCA2P51587 RPL26P28-201ENST00000451325 435 ntBASIC4.22□□□□□ -1.73
BRCA2P51587 IGHV3-32-201ENST00000519182 355 ntBASIC4.22□□□□□ -1.73
BRCA2P51587 AC090246.1-201ENST00000616499 426 ntBASIC4.22□□□□□ -1.73
BRCA2P51587 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.22□□□□□ -1.73
BRCA2P51587 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC4.22□□□□□ -1.73
BRCA2P51587 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BRCA2P51587 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms