Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TNFSF4P23510 AL592148.3-201ENST00000608771 2646 ntBASIC4.9□□□□□ -1.62
TNFSF4P23510 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TNFSF4P23510 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TNFSF4P23510 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 OR5H2-201ENST00000355273 945 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TNFSF4P23510 Y_RNA.169-201ENST00000363745 96 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 RNA5SP500-201ENST00000364486 119 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 AL590084.2-201ENST00000401481 382 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 RPL31P2-201ENST00000413849 377 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 AC004987.3-201ENST00000413879 771 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.9□□□□□ -1.63
TNFSF4P23510 PTP4A1P5-201ENST00000420305 455 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 AC004074.1-201ENST00000421810 1063 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.9□□□□□ -1.63
TNFSF4P23510 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.9□□□□□ -1.63
TNFSF4P23510 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TNFSF4P23510 VN1R10P-201ENST00000447106 875 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 RPL26P28-201ENST00000451325 435 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.9□□□□□ -1.63
TNFSF4P23510 NDUFA5P9-201ENST00000472609 340 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 AC087385.1-201ENST00000475062 312 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.9□□□□□ -1.63
TNFSF4P23510 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 MTCYBP37-201ENST00000510642 1133 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 AC016065.2-201ENST00000514530 444 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 SNORD46.2-201ENST00000516021 102 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 AC078899.1-201ENST00000521432 1185 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.9□□□□□ -1.63
TNFSF4P23510 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.9□□□□□ -1.63
TNFSF4P23510 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.9□□□□□ -1.63
TNFSF4P23510 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.9□□□□□ -1.63
TNFSF4P23510 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.9□□□□□ -1.63
TNFSF4P23510 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.9□□□□□ -1.63
TNFSF4P23510 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.9□□□□□ -1.63
TNFSF4P23510 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.9□□□□□ -1.63
TNFSF4P23510 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.9□□□□□ -1.63
TNFSF4P23510 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.9□□□□□ -1.63
TNFSF4P23510 AC007566.2-201ENST00000603642 413 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 AC078899.5-201ENST00000612475 178 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.9□□□□□ -1.63
TNFSF4P23510 RN7SL544P-201ENST00000617232 284 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.9□□□□□ -1.63
TNFSF4P23510 AL603755.1-201ENST00000619504 163 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 RN7SL763P-201ENST00000620922 284 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 AL359757.1-201ENST00000623176 255 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.9□□□□□ -1.63
TNFSF4P23510 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.9□□□□□ -1.63
TNFSF4P23510 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.9□□□□□ -1.63
TNFSF4P23510 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.9□□□□□ -1.63
TNFSF4P23510 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TNFSF4P23510 EIF2AP4-201ENST00000424793 1781 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
TNFSF4P23510 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 ZNF33CP-201ENST00000432492 2030 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.9□□□□□ -1.63
TNFSF4P23510 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.9□□□□□ -1.63
TNFSF4P23510 OR5BR1P-201ENST00000524992 1330 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.9□□□□□ -1.63
TNFSF4P23510 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TNFSF4P23510 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.9□□□□□ -1.63
TNFSF4P23510 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.9□□□□□ -1.63
TNFSF4P23510 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
TNFSF4P23510 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.9□□□□□ -1.63
TNFSF4P23510 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TNFSF4P23510 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
TNFSF4P23510 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFSF4P23510 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
TNFSF4P23510 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFSF4P23510 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFSF4P23510 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.89□□□□□ -1.63
TNFSF4P23510 AL672167.1-205ENST00000641112 3080 ntBASIC4.89□□□□□ -1.63
TNFSF4P23510 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TNFSF4P23510 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFSF4P23510 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TNFSF4P23510 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.89□□□□□ -1.63
TNFSF4P23510 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TNFSF4P23510 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TNFSF4P23510 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TNFSF4P23510 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFSF4P23510 SNORD116-8-201ENST00000384365 95 ntBASIC4.89□□□□□ -1.63
TNFSF4P23510 ENSAP1-201ENST00000392855 326 ntBASIC4.89□□□□□ -1.63
TNFSF4P23510 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TNFSF4P23510 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFSF4P23510 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFSF4P23510 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.89□□□□□ -1.63
TNFSF4P23510 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.89□□□□□ -1.63
TNFSF4P23510 AL022400.1-201ENST00000423946 935 ntBASIC4.89□□□□□ -1.63
TNFSF4P23510 AC234781.2-201ENST00000426370 994 ntBASIC4.89□□□□□ -1.63
TNFSF4P23510 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms