Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.23□□□□□ -1.73
HCN1O60741 PSMC1P13-201ENST00000458195 985 ntBASIC4.23□□□□□ -1.73
HCN1O60741 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.23□□□□□ -1.73
HCN1O60741 RNU6-1218P-201ENST00000458990 108 ntBASIC4.23□□□□□ -1.73
HCN1O60741 NDUFA5P9-201ENST00000472609 340 ntBASIC4.23□□□□□ -1.73
HCN1O60741 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HCN1O60741 AC108471.1-201ENST00000513977 287 ntBASIC4.23□□□□□ -1.73
HCN1O60741 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.23□□□□□ -1.73
HCN1O60741 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.23□□□□□ -1.73
HCN1O60741 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.23□□□□□ -1.73
HCN1O60741 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.23□□□□□ -1.73
HCN1O60741 AC084757.1-201ENST00000559987 490 ntBASIC4.23□□□□□ -1.73
HCN1O60741 AC027455.1-201ENST00000574104 594 ntBASIC4.23□□□□□ -1.73
HCN1O60741 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.23□□□□□ -1.73
HCN1O60741 AC069061.3-201ENST00000582254 823 ntBASIC4.23□□□□□ -1.73
HCN1O60741 AC091178.1-203ENST00000584586 279 ntBASIC4.23□□□□□ -1.73
HCN1O60741 MTCO2P22-201ENST00000603246 681 ntBASIC4.23□□□□□ -1.73
HCN1O60741 AL133338.2-201ENST00000604292 736 ntBASIC4.23□□□□□ -1.73
HCN1O60741 AC023509.5-201ENST00000617434 807 ntBASIC4.23□□□□□ -1.73
HCN1O60741 AC067931.1-201ENST00000624190 671 ntBASIC4.23□□□□□ -1.73
HCN1O60741 U3.53-201ENST00000628922 216 ntBASIC4.23□□□□□ -1.73
HCN1O60741 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.23□□□□□ -1.73
HCN1O60741 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.23□□□□□ -1.73
HCN1O60741 MFSD8-242ENST00000641690 4199 ntBASIC4.23□□□□□ -1.73
HCN1O60741 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.23□□□□□ -1.73
HCN1O60741 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HCN1O60741 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.23□□□□□ -1.73
HCN1O60741 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.23□□□□□ -1.73
HCN1O60741 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HCN1O60741 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.23□□□□□ -1.73
HCN1O60741 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.22□□□□□ -1.73
HCN1O60741 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HCN1O60741 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HCN1O60741 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.22□□□□□ -1.73
HCN1O60741 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HCN1O60741 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCN1O60741 RNA5SP52-201ENST00000362448 134 ntBASIC4.22□□□□□ -1.73
HCN1O60741 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.22□□□□□ -1.73
HCN1O60741 SDHCP2-201ENST00000398565 501 ntBASIC4.22□□□□□ -1.73
HCN1O60741 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.22□□□□□ -1.73
HCN1O60741 UQCRBP1-201ENST00000421129 336 ntBASIC4.22□□□□□ -1.73
HCN1O60741 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HCN1O60741 AC073464.3-201ENST00000422564 712 ntBASIC4.22□□□□□ -1.73
HCN1O60741 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HCN1O60741 MTCO3P21-201ENST00000430791 643 ntBASIC4.22□□□□□ -1.73
HCN1O60741 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.22□□□□□ -1.73
HCN1O60741 MTCYBP29-201ENST00000436327 1006 ntBASIC4.22□□□□□ -1.73
HCN1O60741 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.22□□□□□ -1.73
HCN1O60741 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.22□□□□□ -1.73
HCN1O60741 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.22□□□□□ -1.73
HCN1O60741 RPL36AP41-201ENST00000493820 306 ntBASIC4.22□□□□□ -1.73
HCN1O60741 AC098799.3-201ENST00000506095 438 ntBASIC4.22□□□□□ -1.73
HCN1O60741 PPBPP1-201ENST00000510807 373 ntBASIC4.22□□□□□ -1.73
HCN1O60741 RNU6-347P-201ENST00000516658 105 ntBASIC4.22□□□□□ -1.73
HCN1O60741 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.22□□□□□ -1.73
HCN1O60741 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.22□□□□□ -1.73
HCN1O60741 AC034205.1-201ENST00000520621 638 ntBASIC4.22□□□□□ -1.73
HCN1O60741 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HCN1O60741 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.22□□□□□ -1.73
HCN1O60741 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.22□□□□□ -1.73
HCN1O60741 MIR4715-201ENST00000584117 79 ntBASIC4.22□□□□□ -1.73
HCN1O60741 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.22□□□□□ -1.73
HCN1O60741 ELOCP28-201ENST00000590044 317 ntBASIC4.22□□□□□ -1.73
HCN1O60741 RPL7P50-201ENST00000600588 727 ntBASIC4.22□□□□□ -1.73
HCN1O60741 AC073091.2-201ENST00000603205 907 ntBASIC4.22□□□□□ -1.73
HCN1O60741 AC005021.1-201ENST00000608730 355 ntBASIC4.22□□□□□ -1.73
HCN1O60741 AC084036.1-201ENST00000609190 508 ntBASIC4.22□□□□□ -1.73
HCN1O60741 MIR378J-201ENST00000611988 109 ntBASIC4.22□□□□□ -1.73
HCN1O60741 AC009032.1-201ENST00000617574 431 ntBASIC4.22□□□□□ -1.73
HCN1O60741 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HCN1O60741 LINC00216-201ENST00000623548 1126 ntBASIC4.22□□□□□ -1.73
HCN1O60741 MIR6715B-201ENST00000637172 77 ntBASIC4.22□□□□□ -1.73
HCN1O60741 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.22□□□□□ -1.73
HCN1O60741 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
HCN1O60741 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HCN1O60741 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HCN1O60741 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCN1O60741 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HCN1O60741 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HCN1O60741 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.22□□□□□ -1.73
HCN1O60741 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCN1O60741 AC108467.2-201ENST00000617640 1597 ntBASIC4.22□□□□□ -1.73
HCN1O60741 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCN1O60741 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HCN1O60741 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HCN1O60741 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HCN1O60741 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HCN1O60741 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HCN1O60741 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HCN1O60741 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HCN1O60741 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HCN1O60741 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HCN1O60741 MIR93-201ENST00000385024 80 ntBASIC4.21□□□□□ -1.74
HCN1O60741 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.21□□□□□ -1.74
HCN1O60741 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.21□□□□□ -1.74
HCN1O60741 RPS12P5-201ENST00000423449 371 ntBASIC4.21□□□□□ -1.74
HCN1O60741 RPL18P10-201ENST00000425606 538 ntBASIC4.21□□□□□ -1.74
HCN1O60741 TRIM60P13-201ENST00000432350 1283 ntBASIC4.21□□□□□ -1.74
HCN1O60741 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.21□□□□□ -1.74
HCN1O60741 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms