Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.44□□□□□ -1.7
SNX3O60493 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.44□□□□□ -1.7
SNX3O60493 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.44□□□□□ -1.7
SNX3O60493 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX3O60493 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX3O60493 BNIP3P27-201ENST00000599991 412 ntBASIC4.44□□□□□ -1.7
SNX3O60493 AC020910.3-201ENST00000603701 874 ntBASIC4.44□□□□□ -1.7
SNX3O60493 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.44□□□□□ -1.7
SNX3O60493 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.44□□□□□ -1.7
SNX3O60493 AL160290.3-201ENST00000604869 165 ntBASIC4.44□□□□□ -1.7
SNX3O60493 AP001521.2-201ENST00000608772 546 ntBASIC4.44□□□□□ -1.7
SNX3O60493 AC018645.2-201ENST00000609151 472 ntBASIC4.44□□□□□ -1.7
SNX3O60493 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX3O60493 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX3O60493 AL356121.2-201ENST00000624715 780 ntBASIC4.44□□□□□ -1.7
SNX3O60493 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX3O60493 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX3O60493 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SNX3O60493 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX3O60493 AC027228.2-201ENST00000567141 2154 ntBASIC4.44□□□□□ -1.7
SNX3O60493 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX3O60493 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
SNX3O60493 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SNX3O60493 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SNX3O60493 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX3O60493 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX3O60493 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX3O60493 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX3O60493 RNF6P1-201ENST00000444889 1784 ntBASIC4.43□□□□□ -1.7
SNX3O60493 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.43□□□□□ -1.7
SNX3O60493 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.43□□□□□ -1.7
SNX3O60493 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
SNX3O60493 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SNX3O60493 RNU6-304P-201ENST00000364855 107 ntBASIC4.43□□□□□ -1.7
SNX3O60493 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SNX3O60493 AP000357.1-201ENST00000409926 1165 ntBASIC4.43□□□□□ -1.7
SNX3O60493 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX3O60493 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX3O60493 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.43□□□□□ -1.7
SNX3O60493 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX3O60493 RAD23BP1-201ENST00000421404 1227 ntBASIC4.43□□□□□ -1.7
SNX3O60493 MED6P1-201ENST00000439659 713 ntBASIC4.43□□□□□ -1.7
SNX3O60493 RNF2P1-201ENST00000442955 1010 ntBASIC4.43□□□□□ -1.7
SNX3O60493 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX3O60493 H2AFZP5-201ENST00000446960 382 ntBASIC4.43□□□□□ -1.7
SNX3O60493 AL591363.1-201ENST00000450091 483 ntBASIC4.43□□□□□ -1.7
SNX3O60493 AC234781.3-201ENST00000452540 973 ntBASIC4.43□□□□□ -1.7
SNX3O60493 RNU6-1218P-201ENST00000458990 108 ntBASIC4.43□□□□□ -1.7
SNX3O60493 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX3O60493 CCDC75P1-201ENST00000469247 791 ntBASIC4.43□□□□□ -1.7
SNX3O60493 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX3O60493 AC104687.1-201ENST00000485829 412 ntBASIC4.43□□□□□ -1.7
SNX3O60493 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX3O60493 AC111193.1-201ENST00000504097 155 ntBASIC4.43□□□□□ -1.7
SNX3O60493 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX3O60493 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX3O60493 VWA8P1-201ENST00000510889 176 ntBASIC4.43□□□□□ -1.7
SNX3O60493 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX3O60493 AC090281.1-201ENST00000523019 276 ntBASIC4.43□□□□□ -1.7
SNX3O60493 AC104115.2-201ENST00000523026 687 ntBASIC4.43□□□□□ -1.7
SNX3O60493 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX3O60493 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SNX3O60493 AP003717.3-201ENST00000544832 1180 ntBASIC4.43□□□□□ -1.7
SNX3O60493 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX3O60493 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX3O60493 AC105129.1-201ENST00000560250 297 ntBASIC4.43□□□□□ -1.7
SNX3O60493 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.43□□□□□ -1.7
SNX3O60493 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX3O60493 AC124856.1-201ENST00000600819 896 ntBASIC4.43□□□□□ -1.7
SNX3O60493 BPIFA4P-203ENST00000603168 689 ntBASIC4.43□□□□□ -1.7
SNX3O60493 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX3O60493 AC144521.1-201ENST00000607148 956 ntBASIC4.43□□□□□ -1.7
SNX3O60493 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX3O60493 AC008759.3-201ENST00000613300 508 ntBASIC4.43□□□□□ -1.7
SNX3O60493 AC005156.1-201ENST00000613371 573 ntBASIC4.43□□□□□ -1.7
SNX3O60493 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX3O60493 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.43□□□□□ -1.7
SNX3O60493 AL049777.1-201ENST00000622740 518 ntBASIC4.43□□□□□ -1.7
SNX3O60493 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.43□□□□□ -1.7
SNX3O60493 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX3O60493 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX3O60493 AC132825.7-201ENST00000638744 335 ntBASIC4.43□□□□□ -1.7
SNX3O60493 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SNX3O60493 BX005019.1-201ENST00000561881 1810 ntBASIC4.43□□□□□ -1.7
SNX3O60493 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.43□□□□□ -1.7
SNX3O60493 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.43□□□□□ -1.7
SNX3O60493 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.43□□□□□ -1.7
SNX3O60493 NCLP2-201ENST00000416078 1462 ntBASIC4.43□□□□□ -1.7
SNX3O60493 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.43□□□□□ -1.7
SNX3O60493 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX3O60493 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX3O60493 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNX3O60493 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNX3O60493 RNA5SP27-201ENST00000363839 119 ntBASIC4.42□□□□□ -1.7
SNX3O60493 RN7SKP269-201ENST00000365545 319 ntBASIC4.42□□□□□ -1.7
SNX3O60493 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
SNX3O60493 RNU6-317P-201ENST00000384031 107 ntBASIC4.42□□□□□ -1.7
SNX3O60493 AP002784.2-201ENST00000397300 549 ntBASIC4.42□□□□□ -1.7
SNX3O60493 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.42□□□□□ -1.7
SNX3O60493 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms