Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 ATP5F1P7-201ENST00000567330 760 ntBASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 MIR5699-201ENST00000578903 90 ntBASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 AP005136.1-201ENST00000579765 429 ntBASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 VN1R83P-201ENST00000595685 445 ntBASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 AL021707.7-201ENST00000607991 416 ntBASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 VN1R74P-201ENST00000613259 503 ntBASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TCRBV5S1A1TA0A578 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC005261.4-201ENST00000600047 1385 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC245100.2-201ENST00000454544 1679 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 RNU6-353P-201ENST00000364266 108 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 SNORD116.1-201ENST00000365628 92 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 UBBP2-201ENST00000376781 231 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 SPTLC1P2-201ENST00000407089 121 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 NPM1P40-201ENST00000412758 733 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC017078.1-201ENST00000416146 368 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 OR4K6P-201ENST00000416478 897 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 TAF13P2-201ENST00000416876 286 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 RPL36AP10-201ENST00000421785 322 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 OR2AM1P-201ENST00000422137 422 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AL365203.2-201ENST00000423444 196 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 MOB1AP1-201ENST00000430903 535 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 RPS17P8-201ENST00000434525 335 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AL627308.1-201ENST00000435693 821 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC073648.4-201ENST00000442655 781 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 TDGF1P1-201ENST00000445734 527 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 MTCO2P7-201ENST00000446518 666 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC007327.1-201ENST00000447461 264 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 NPM1P13-201ENST00000452663 865 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 NECAP1P2-201ENST00000455668 727 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC107015.1-201ENST00000466902 747 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 NDUFB4P12-201ENST00000513465 390 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC087477.6-201ENST00000559595 843 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC090888.1-201ENST00000561335 1141 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 MIR3936-201ENST00000584304 110 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 MRPS35P3-201ENST00000603189 709 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 IMMP1LP1-201ENST00000605170 488 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 RNU6-84P-201ENST00000607737 102 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AP003392.5-201ENST00000607857 415 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AL450489.1-201ENST00000612071 468 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 MIR8069-1-201ENST00000616627 86 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC139769.3-201ENST00000618383 175 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 MIR8069-2-201ENST00000621412 86 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC015871.5-202ENST00000623252 701 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC091905.4-201ENST00000623432 202 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 ZNF663P-202ENST00000641770 1131 ntBASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TCRBV5S1A1TA0A578 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms