Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 DUXAP6-201ENST00000553858 601 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 SETP1-201ENST00000556014 845 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AC068714.1-201ENST00000559623 800 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AC022662.1-201ENST00000580252 331 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AP000769.2-201ENST00000602344 396 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AP000238.1-201ENST00000608759 426 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AC099676.1-201ENST00000608886 657 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AC055764.2-201ENST00000610089 670 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AL592148.2-201ENST00000612210 372 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AC011939.3-201ENST00000613686 466 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AC068792.1-201ENST00000621354 417 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AC135068.12-201ENST00000637370 931 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AC114774.1-201ENST00000507410 1770 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 AC010329.2-201ENST00000595195 2737 ntBASIC5.03□□□□□ -1.6
CCDC187A0A096LP49 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 BX005019.1-201ENST00000561881 1810 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC009313.2-201ENST00000417893 1941 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 NACA3P-201ENST00000359690 648 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 RN7SKP149-201ENST00000363008 344 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 RNA5SP87-201ENST00000384155 118 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 MIR1303-201ENST00000408625 86 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 RNU6-77P-201ENST00000410554 91 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC016397.1-201ENST00000412463 242 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC092017.2-201ENST00000427600 362 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 BX276092.6-201ENST00000430476 250 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC002553.2-201ENST00000453217 340 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 RPL10P17-201ENST00000453852 316 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 BX276092.8-201ENST00000455722 250 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 MTND2P28-201ENST00000457540 1044 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC079168.1-201ENST00000458741 345 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC023632.1-201ENST00000518463 375 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC105233.3-201ENST00000531125 744 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 GSTP1P1-201ENST00000548078 319 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC063949.1-201ENST00000552900 865 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC044913.1-201ENST00000557200 430 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC087821.2-201ENST00000637086 450 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 MIR1322-201ENST00000638013 71 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 MFSD8-245ENST00000641743 948 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AC104454.1-201ENST00000421341 1401 ntBASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC187A0A096LP49 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms