Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 MTND4LP26-201ENST00000518144 282 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC092709.1-201ENST00000521355 1045 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 HMGB1P42-201ENST00000532126 553 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 OR7K1P-201ENST00000546439 926 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 IGBP1P1-201ENST00000554337 1009 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC136619.2-201ENST00000563361 631 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC012414.6-201ENST00000568241 401 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 MTCYBP22-201ENST00000603788 447 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 NDUFA8P1-201ENST00000605525 367 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AL391497.1-201ENST00000608671 547 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AL355073.2-201ENST00000612106 557 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 MIR7973-1-201ENST00000614683 76 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 SAMMSON-209ENST00000641222 1100 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 MIR193BHG-214ENST00000641765 509 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC005005.4-201ENST00000623789 16698 ntBASIC5.9□□□□□ -1.46
PPARGC1AQ9UBK2 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.9□□□□□ -1.47
PPARGC1AQ9UBK2 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.9□□□□□ -1.47
PPARGC1AQ9UBK2 DCAF13P3-201ENST00000561147 1334 ntBASIC5.9□□□□□ -1.47
PPARGC1AQ9UBK2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PPARGC1AQ9UBK2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PPARGC1AQ9UBK2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
PPARGC1AQ9UBK2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.9□□□□□ -1.47
PPARGC1AQ9UBK2 LINC01963-201ENST00000562038 3148 ntBASIC5.9□□□□□ -1.47
PPARGC1AQ9UBK2 DDX18P4-201ENST00000511690 1966 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 IGKV7-3-201ENST00000357453 298 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 RNA5SP510-201ENST00000364697 99 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC136624.1-201ENST00000400791 413 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 HMGB1P20-201ENST00000402555 677 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AL512430.2-201ENST00000406786 339 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 RN7SKP222-201ENST00000410651 315 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 PIGPP2-201ENST00000411569 458 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 RPL34P3-201ENST00000421454 338 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC007559.1-201ENST00000428736 355 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 RPS25P9-201ENST00000435591 252 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 RPL12P39-201ENST00000455456 496 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 SNRPGP9-201ENST00000456025 225 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC090071.1-201ENST00000507713 644 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 CYCSP22-201ENST00000517555 339 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AL513477.2-201ENST00000607858 568 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AC106028.5-201ENST00000610332 395 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 U6.42-201ENST00000618440 107 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 ADAM24P-201ENST00000398655 2101 ntBASIC5.89□□□□□ -1.47
PPARGC1AQ9UBK2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms