Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HSPD1P11-201ENST00000508643 1702 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CISHQ9NSE2 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.71
CISHQ9NSE2 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CISHQ9NSE2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.34□□□□□ -1.72
CISHQ9NSE2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CISHQ9NSE2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CISHQ9NSE2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CISHQ9NSE2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CISHQ9NSE2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CISHQ9NSE2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CISHQ9NSE2 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CISHQ9NSE2 RAB28P1-201ENST00000411517 641 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 RCC2P2-201ENST00000422174 918 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 AL034379.1-201ENST00000423216 253 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 OR5BE1P-201ENST00000425977 939 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 VDAC1P6-201ENST00000430062 855 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 LDHBP3-201ENST00000514909 822 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 DYNLL1P4-201ENST00000549314 266 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 AC136624.4-201ENST00000573044 370 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 AC104662.1-201ENST00000604448 511 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 AC012603.1-201ENST00000606424 528 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 AC016542.2-201ENST00000624201 619 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 OR5BE1P-202ENST00000641168 1176 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CISHQ9NSE2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 AC027228.2-201ENST00000567141 2154 ntBASIC4.33□□□□□ -1.72
CISHQ9NSE2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CISHQ9NSE2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 BTBD10P1-201ENST00000549824 1352 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 AC115285.1-201ENST00000424879 736 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 MTCO1P54-201ENST00000430139 712 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 AC114755.5-201ENST00000447760 831 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 AL591623.2-201ENST00000449978 222 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 AL591363.1-201ENST00000450091 483 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 RNU7-157P-201ENST00000459600 66 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 RPL5P16-201ENST00000471467 790 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 OR9N1P-201ENST00000491296 333 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 AC092593.2-201ENST00000513866 913 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 AC110743.1-201ENST00000584870 478 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 RNU4-89P-201ENST00000607443 133 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 MIR6868-201ENST00000611215 58 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 AC079298.2-201ENST00000623885 459 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 ZNF962P-201ENST00000443465 3140 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 RLIMP1-201ENST00000339626 1680 ntBASIC4.32□□□□□ -1.72
CISHQ9NSE2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.32□□□□□ -1.72
CISHQ9NSE2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CISHQ9NSE2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CISHQ9NSE2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CISHQ9NSE2 AC092111.2-201ENST00000611627 1414 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CISHQ9NSE2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CISHQ9NSE2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CISHQ9NSE2 MT-RNR1-201ENST00000389680 954 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.31□□□□□ -1.72
CISHQ9NSE2 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.31□□□□□ -1.72
CISHQ9NSE2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.31□□□□□ -1.72
CISHQ9NSE2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.31□□□□□ -1.72
CISHQ9NSE2 RN7SL271P-201ENST00000487601 295 ntBASIC4.31□□□□□ -1.72
CISHQ9NSE2 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms