Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RNA5SP113-201ENST00000410486 84 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 OR51B3P-201ENST00000412287 913 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 CEACAMP8-201ENST00000413902 580 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 PTP4A1P7-201ENST00000423476 514 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 OR2B7P-201ENST00000429302 934 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 MTATP6P17-201ENST00000431030 672 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 FABP5P3-201ENST00000437960 408 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 HMGB1P5-202ENST00000451497 985 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC091685.2-201ENST00000454924 864 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 RPS5P7-201ENST00000456664 608 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC107398.1-201ENST00000486904 505 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 TPT1P3-201ENST00000492841 512 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 RN7SKP141-201ENST00000516167 338 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 RNU6-1308P-201ENST00000516817 103 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC034205.1-201ENST00000520621 638 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 HIGD1AP18-201ENST00000520730 278 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 GSTP1P1-201ENST00000548078 319 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 CYB5AP5-201ENST00000549779 389 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC087888.1-201ENST00000550884 1254 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC084373.1-201ENST00000603311 235 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC023813.4-201ENST00000607580 580 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 RPL23AP61-201ENST00000623642 466 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC093875.1-201ENST00000623688 504 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 AC006927.2-201ENST00000639256 389 ntBASIC4.84□□□□□ -1.63
PCDH9Q9HC56 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PCDH9Q9HC56 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCDH9Q9HC56 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCDH9Q9HC56 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
PCDH9Q9HC56 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC007382.1-201ENST00000624376 2618 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC007342.7-201ENST00000624610 2337 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC092435.4-201ENST00000623012 4159 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AP001273.1-201ENST00000624493 3152 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 RNU6-298P-201ENST00000390888 96 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AP002784.2-201ENST00000397300 549 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AL512430.2-201ENST00000406786 339 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC004448.2-201ENST00000422360 586 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 MTCYBP12-201ENST00000440559 1134 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC023512.1-201ENST00000444513 499 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC069540.1-201ENST00000446320 988 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AL645937.3-201ENST00000453647 936 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 CDH12P2-201ENST00000504393 298 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC091868.1-201ENST00000508746 304 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC109635.6-201ENST00000525487 1113 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 OR5D15P-201ENST00000531671 942 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AP001880.2-201ENST00000538233 448 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 SULT1C2P2-201ENST00000562517 294 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 MIR3667-201ENST00000581025 74 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC124283.4-201ENST00000581815 456 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC112220.2-201ENST00000605513 533 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC013244.3-201ENST00000605614 388 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AL135786.2-201ENST00000608422 615 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 VN1R9P-201ENST00000614184 867 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 uc_338.18-201ENST00000615451 175 ntBASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PCDH9Q9HC56 SDAD1P1-202ENST00000524156 2051 ntBASIC4.82□□□□□ -1.64
PCDH9Q9HC56 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms