Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC069061.3-201ENST00000582254 823 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 MIR5690-201ENST00000583739 73 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC036176.3-201ENST00000602456 418 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 COX6CP16-201ENST00000603667 216 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC012368.3-201ENST00000604190 219 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 FAM27E4-201ENST00000605259 342 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AL049794.2-201ENST00000616301 365 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 SNHG22-203ENST00000617833 660 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 MRPL57P3-201ENST00000619218 176 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC233309.1-201ENST00000619522 751 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC025162.2-201ENST00000619602 560 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC009318.4-201ENST00000620496 486 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 MIR665-201ENST00000635949 72 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 5S_rRNA.29-201ENST00000641250 107 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 CTNNA1P1-201ENST00000515849 2728 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AL023806.3-201ENST00000638502 2704 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC099654.7-201ENST00000635788 2127 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 DLEU2L-201ENST00000371086 3555 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AL359396.1-201ENST00000623151 2376 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 USP3-201ENST00000268049 5311 ntTSL 5 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC017071.1-201ENST00000564407 2204 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 AC134026.1-201ENST00000623249 2239 ntBASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC2.36□□□□□ -2.03
KRTAP4-3Q9BYR4 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
KRTAP4-3Q9BYR4 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
KRTAP4-3Q9BYR4 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
KRTAP4-3Q9BYR4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC2.35□□□□□ -2.03
KRTAP4-3Q9BYR4 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
KRTAP4-3Q9BYR4 ARHGAP42P5-201ENST00000548856 2936 ntBASIC2.35□□□□□ -2.03
KRTAP4-3Q9BYR4 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
KRTAP4-3Q9BYR4 USP13-203ENST00000496897 2747 ntTSL 2 BASIC2.35□□□□□ -2.03
KRTAP4-3Q9BYR4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
KRTAP4-3Q9BYR4 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC2.35□□□□□ -2.03
KRTAP4-3Q9BYR4 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
KRTAP4-3Q9BYR4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
KRTAP4-3Q9BYR4 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms