Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 RNU5A-6P-201ENST00000384136 116 ntBASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 SLC9B1P2-201ENST00000398120 1184 ntBASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 RPL22P17-201ENST00000438729 315 ntBASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AL591623.2-201ENST00000449978 222 ntBASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 LARP1BP2-201ENST00000486594 519 ntBASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AC024884.1-201ENST00000620583 399 ntBASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AL445264.1-201ENST00000621719 171 ntBASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AL596275.2-204ENST00000641628 552 ntBASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AL596275.2-206ENST00000641957 626 ntBASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.9□□□□□ -1.3
TRAIPQ9BWF2 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TRAIPQ9BWF2 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TRAIPQ9BWF2 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.9□□□□□ -1.31
TRAIPQ9BWF2 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.9□□□□□ -1.31
TRAIPQ9BWF2 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.9□□□□□ -1.31
TRAIPQ9BWF2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.9□□□□□ -1.31
TRAIPQ9BWF2 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TRAIPQ9BWF2 AC007159.1-201ENST00000566529 4706 ntBASIC6.9□□□□□ -1.31
TRAIPQ9BWF2 AC097714.1-201ENST00000511272 1647 ntBASIC6.9□□□□□ -1.31
TRAIPQ9BWF2 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TRAIPQ9BWF2 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
TRAIPQ9BWF2 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
TRAIPQ9BWF2 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AL161781.1-201ENST00000354277 403 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 RNA5SP346-201ENST00000363541 121 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 SNORD82-201ENST00000365530 70 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 SNORA51.9-201ENST00000384295 124 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 SNORA68.2-201ENST00000391263 128 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC136624.1-201ENST00000400791 413 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 SNRPEP6-201ENST00000407465 277 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 RNU2-66P-201ENST00000410650 161 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 FCF1P9-201ENST00000412546 282 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AL133482.1-201ENST00000415988 498 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AL513174.1-201ENST00000423182 629 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 NMNAT1P2-201ENST00000435192 860 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC068228.1-201ENST00000461723 211 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC092824.1-201ENST00000483524 576 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC034222.1-201ENST00000494052 532 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC107401.1-201ENST00000503426 685 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 SNX18P24-201ENST00000505249 671 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 PRMT5P1-201ENST00000514351 598 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 RN7SKP35-201ENST00000517210 151 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 MTND1P5-201ENST00000517906 940 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC022878.1-201ENST00000530684 149 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC107918.3-201ENST00000533272 382 ntBASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC6.89□□□□□ -1.31
TRAIPQ9BWF2 MIR4528-201ENST00000577763 90 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms