Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC235565.1-201ENST00000456962 1325 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 BMS1P3-201ENST00000372011 932 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 MIR621-201ENST00000384919 96 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 SNORA40.2-201ENST00000390847 128 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 ATP5F1P2-201ENST00000398143 760 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC009804.1-201ENST00000400949 179 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 SNORA11C-201ENST00000408532 129 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 RNU6-77P-201ENST00000410554 91 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 RPF2P1-201ENST00000424137 906 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 TXNP5-201ENST00000441043 315 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC233982.1-201ENST00000451247 436 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AL691482.1-201ENST00000453255 87 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AL645937.3-201ENST00000453647 936 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 MRPL35P4-201ENST00000453682 566 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 RN7SL443P-201ENST00000464331 290 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 NDUFA5P9-201ENST00000472609 340 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 PPIAP19-201ENST00000486414 492 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 RN7SL547P-201ENST00000490793 290 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AP000563.1-201ENST00000490865 758 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AL035404.1-201ENST00000497982 568 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 RN7SKP46-201ENST00000515942 234 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 EIF4A2P5-201ENST00000529914 499 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC024940.3-201ENST00000538551 316 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AL358913.1-201ENST00000554342 121 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 NIFKP8-201ENST00000560500 874 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC009094.1-201ENST00000564443 426 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 CYCSP40-201ENST00000575927 294 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 DUXAP3-201ENST00000603616 594 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AC087283.1-201ENST00000604029 1074 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 AP000238.1-201ENST00000608759 426 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 MIR6778-201ENST00000617912 73 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 U6.48-201ENST00000618523 106 ntBASIC4.53□□□□□ -1.68
SHFQ7M4L6 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHFQ7M4L6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
SHFQ7M4L6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
SHFQ7M4L6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.52□□□□□ -1.69
SHFQ7M4L6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHFQ7M4L6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHFQ7M4L6 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHFQ7M4L6 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.52□□□□□ -1.69
SHFQ7M4L6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.52□□□□□ -1.69
SHFQ7M4L6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.52□□□□□ -1.69
SHFQ7M4L6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SHFQ7M4L6 AL606537.1-201ENST00000607258 2011 ntBASIC4.52□□□□□ -1.69
SHFQ7M4L6 SNORD116.1-201ENST00000365628 92 ntBASIC4.52□□□□□ -1.69
SHFQ7M4L6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHFQ7M4L6 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SHFQ7M4L6 RNY3P9-201ENST00000384727 106 ntBASIC4.52□□□□□ -1.69
SHFQ7M4L6 MIR600-201ENST00000385007 98 ntBASIC4.52□□□□□ -1.69
SHFQ7M4L6 ERHP2-201ENST00000402323 299 ntBASIC4.52□□□□□ -1.69
SHFQ7M4L6 MIR1182-201ENST00000408363 97 ntBASIC4.52□□□□□ -1.69
SHFQ7M4L6 RNA5SP178-201ENST00000410380 128 ntBASIC4.52□□□□□ -1.69
SHFQ7M4L6 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.52□□□□□ -1.69
SHFQ7M4L6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.52□□□□□ -1.69
SHFQ7M4L6 CYCSP10-201ENST00000417973 294 ntBASIC4.52□□□□□ -1.69
SHFQ7M4L6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.52□□□□□ -1.69
SHFQ7M4L6 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.52□□□□□ -1.69
SHFQ7M4L6 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.52□□□□□ -1.69
SHFQ7M4L6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.52□□□□□ -1.69
SHFQ7M4L6 MTCO3P21-201ENST00000430791 643 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms