Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN6P56747 AC009237.10-201ENST00000414112 510 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.23□□□□□ -1.73
CLDN6P56747 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN6P56747 AC093084.1-201ENST00000424233 687 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN6P56747 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN6P56747 RPL21P89-201ENST00000444021 467 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 CASP3P1-201ENST00000446037 609 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 PTMAP3-201ENST00000447474 330 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 RAB28P3-201ENST00000448325 597 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN6P56747 AL445433.1-201ENST00000457507 257 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 AC108751.2-201ENST00000469993 231 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CLDN6P56747 RN7SL691P-201ENST00000494487 301 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN6P56747 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN6P56747 RNA5SP49-201ENST00000516450 115 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 RNA5SP519-201ENST00000516480 119 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.23□□□□□ -1.73
CLDN6P56747 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN6P56747 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN6P56747 SETP1-201ENST00000556014 845 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.23□□□□□ -1.73
CLDN6P56747 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN6P56747 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.23□□□□□ -1.73
CLDN6P56747 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.23□□□□□ -1.73
CLDN6P56747 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN6P56747 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN6P56747 MIR6891-201ENST00000618788 93 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 MIR8059-201ENST00000620427 81 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 AC140479.6-201ENST00000633535 357 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 AL450326.2-201ENST00000421913 1962 ntBASIC4.23□□□□□ -1.73
CLDN6P56747 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN6P56747 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN6P56747 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.23□□□□□ -1.73
CLDN6P56747 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN6P56747 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN6P56747 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLDN6P56747 RLIMP1-201ENST00000339626 1680 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN6P56747 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN6P56747 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
CLDN6P56747 AL133268.1-201ENST00000405676 1401 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN6P56747 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN6P56747 AC092435.4-201ENST00000623012 4159 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN6P56747 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN6P56747 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLDN6P56747 AL080315.1-201ENST00000406055 466 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 RNA5SP36-201ENST00000410197 133 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN6P56747 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.22□□□□□ -1.73
CLDN6P56747 AL445584.1-201ENST00000431451 330 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN6P56747 AC012671.1-201ENST00000451912 203 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 VN1R105P-201ENST00000486595 910 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN6P56747 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN6P56747 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.22□□□□□ -1.73
CLDN6P56747 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN6P56747 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN6P56747 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.22□□□□□ -1.73
CLDN6P56747 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.22□□□□□ -1.73
CLDN6P56747 SNX6P1-201ENST00000601728 1224 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 AL137246.1-201ENST00000607072 977 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.22□□□□□ -1.73
CLDN6P56747 AC007546.1-201ENST00000619452 559 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 AL445363.3-201ENST00000623080 671 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.22□□□□□ -1.73
CLDN6P56747 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLDN6P56747 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.22□□□□□ -1.73
CLDN6P56747 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN6P56747 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN6P56747 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN6P56747 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.22□□□□□ -1.73
CLDN6P56747 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.22□□□□□ -1.73
CLDN6P56747 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN6P56747 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.22□□□□□ -1.73
CLDN6P56747 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN6P56747 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CLDN6P56747 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN6P56747 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
CLDN6P56747 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CLDN6P56747 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CLDN6P56747 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.21□□□□□ -1.73
CLDN6P56747 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
CLDN6P56747 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CLDN6P56747 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN6P56747 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN6P56747 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CLDN6P56747 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN6P56747 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.21□□□□□ -1.74
CLDN6P56747 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN6P56747 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CLDN6P56747 MIR365B-201ENST00000362317 111 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 RNA5SP513-201ENST00000364648 118 ntBASIC4.21□□□□□ -1.74
CLDN6P56747 NCSTNP1-201ENST00000406229 144 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms