Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC019206.1-201ENST00000621938 425 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AP001005.3-201ENST00000622049 129 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AC008993.2-201ENST00000631744 806 ntBASIC4.42□□□□□ -1.7
CDH11P55287 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH11P55287 AL596275.2-204ENST00000641628 552 ntBASIC4.42□□□□□ -1.7
CDH11P55287 AL596275.2-206ENST00000641957 626 ntBASIC4.42□□□□□ -1.7
CDH11P55287 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH11P55287 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH11P55287 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH11P55287 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH11P55287 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH11P55287 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CDH11P55287 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH11P55287 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDH11P55287 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDH11P55287 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH11P55287 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDH11P55287 RNU1-83P-201ENST00000363426 164 ntBASIC4.41□□□□□ -1.7
CDH11P55287 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 RNU6-932P-201ENST00000391108 106 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AL035419.1-201ENST00000397037 564 ntBASIC4.41□□□□□ -1.7
CDH11P55287 RN7SKP199-201ENST00000410325 305 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 TCEA1P4-201ENST00000415066 844 ntBASIC4.41□□□□□ -1.7
CDH11P55287 E2F6P2-201ENST00000420708 748 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AL358176.3-201ENST00000420757 454 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 USP12PY-201ENST00000427677 1064 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 AC114973.1-201ENST00000429057 632 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 AC004938.1-201ENST00000438468 308 ntBASIC4.41□□□□□ -1.7
CDH11P55287 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 KNOP1P3-201ENST00000446933 426 ntBASIC4.41□□□□□ -1.7
CDH11P55287 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 IGHV5-78-201ENST00000450948 295 ntBASIC4.41□□□□□ -1.7
CDH11P55287 RPS3AP53-201ENST00000454716 778 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 AC021205.1-201ENST00000468797 348 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 RPS27AP16-201ENST00000492222 470 ntBASIC4.41□□□□□ -1.7
CDH11P55287 RN7SL244P-201ENST00000493405 297 ntBASIC4.41□□□□□ -1.7
CDH11P55287 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.41□□□□□ -1.7
CDH11P55287 AC096571.1-202ENST00000506634 735 ntBASIC4.41□□□□□ -1.7
CDH11P55287 COX6B1P5-201ENST00000509843 249 ntBASIC4.41□□□□□ -1.7
CDH11P55287 CDH12P4-201ENST00000517835 295 ntBASIC4.41□□□□□ -1.7
CDH11P55287 CDH12P3-201ENST00000517935 295 ntBASIC4.41□□□□□ -1.7
CDH11P55287 CDH12P1-201ENST00000518435 295 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.41□□□□□ -1.7
CDH11P55287 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.41□□□□□ -1.7
CDH11P55287 OR7E128P-201ENST00000532736 1024 ntBASIC4.41□□□□□ -1.7
CDH11P55287 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.41□□□□□ -1.7
CDH11P55287 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 MIR4789-201ENST00000577469 82 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.41□□□□□ -1.7
CDH11P55287 MIR6820-201ENST00000611508 62 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AL627230.1-201ENST00000613077 211 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AL591926.8-201ENST00000616876 211 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH11P55287 AC091953.3-201ENST00000623220 236 ntBASIC4.41□□□□□ -1.7
CDH11P55287 AC145207.9-201ENST00000623802 325 ntBASIC4.41□□□□□ -1.7
CDH11P55287 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH11P55287 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.41□□□□□ -1.7
CDH11P55287 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH11P55287 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH11P55287 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 MAPK10-303ENST00000641324 3959 ntBASIC4.41□□□□□ -1.7
CDH11P55287 CASC19-284ENST00000642142 1868 ntBASIC4.41□□□□□ -1.7
CDH11P55287 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH11P55287 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
CDH11P55287 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDH11P55287 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.4□□□□□ -1.7
CDH11P55287 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.4□□□□□ -1.7
CDH11P55287 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDH11P55287 AL672167.1-203ENST00000641299 2975 ntBASIC4.4□□□□□ -1.7
CDH11P55287 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDH11P55287 AL606537.1-201ENST00000607258 2011 ntBASIC4.4□□□□□ -1.7
CDH11P55287 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.4□□□□□ -1.7
CDH11P55287 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.4□□□□□ -1.7
CDH11P55287 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDH11P55287 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDH11P55287 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms