Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC021755.4-201ENST00000616620 456 ntBASIC5.24□□□□□ -1.57
HOXD12P35452 RN7SL722P-201ENST00000617780 284 ntBASIC5.24□□□□□ -1.57
HOXD12P35452 RN7SL565P-201ENST00000618246 284 ntBASIC5.24□□□□□ -1.57
HOXD12P35452 AC087385.3-201ENST00000620477 187 ntBASIC5.24□□□□□ -1.57
HOXD12P35452 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.24□□□□□ -1.57
HOXD12P35452 AC004777.1-201ENST00000624317 287 ntBASIC5.24□□□□□ -1.57
HOXD12P35452 MIR7641-1-201ENST00000627518 61 ntBASIC5.24□□□□□ -1.57
HOXD12P35452 AC135068.12-201ENST00000637370 931 ntBASIC5.24□□□□□ -1.57
HOXD12P35452 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXD12P35452 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD12P35452 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD12P35452 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD12P35452 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HOXD12P35452 AC092747.4-201ENST00000620519 1861 ntBASIC5.24□□□□□ -1.57
HOXD12P35452 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD12P35452 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD12P35452 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD12P35452 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD12P35452 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD12P35452 AC120338.1-201ENST00000625074 1541 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD12P35452 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HOXD12P35452 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HOXD12P35452 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HOXD12P35452 MIR513B-201ENST00000385136 84 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD12P35452 AL359643.1-201ENST00000404109 423 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD12P35452 RPL22P18-201ENST00000417197 377 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.23□□□□□ -1.57
HOXD12P35452 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXD12P35452 HSFY3P-201ENST00000444242 1191 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXD12P35452 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXD12P35452 PTGES3P5-201ENST00000455109 434 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 RPS29P33-201ENST00000456717 146 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 RPL37P3-201ENST00000456825 293 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 OR52A4P-201ENST00000472867 958 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXD12P35452 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXD12P35452 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXD12P35452 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.23□□□□□ -1.57
HOXD12P35452 IGKV2-36-201ENST00000519999 223 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXD12P35452 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXD12P35452 MTATP6P15-201ENST00000527233 835 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 NDUFS5P6-201ENST00000529136 295 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.23□□□□□ -1.57
HOXD12P35452 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HOXD12P35452 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXD12P35452 BNIP3P1-201ENST00000547295 580 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 AC087897.1-201ENST00000550134 156 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD12P35452 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXD12P35452 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXD12P35452 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXD12P35452 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXD12P35452 AC138907.10-201ENST00000623708 983 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXD12P35452 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HOXD12P35452 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 AC017007.4-201ENST00000503353 1352 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD12P35452 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HOXD12P35452 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD12P35452 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD12P35452 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HOXD12P35452 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD12P35452 USP9YP4-201ENST00000424401 1745 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 AL137100.1-201ENST00000556703 1620 ntBASIC5.23□□□□□ -1.57
HOXD12P35452 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD12P35452 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD12P35452 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.22□□□□□ -1.57
HOXD12P35452 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD12P35452 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
HOXD12P35452 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD12P35452 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD12P35452 RNU4-28P-201ENST00000364739 141 ntBASIC5.22□□□□□ -1.57
HOXD12P35452 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXD12P35452 RNU6-932P-201ENST00000391108 106 ntBASIC5.22□□□□□ -1.57
HOXD12P35452 AL021331.1-201ENST00000402817 582 ntBASIC5.22□□□□□ -1.57
HOXD12P35452 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD12P35452 MTND4P3-201ENST00000417829 541 ntBASIC5.22□□□□□ -1.57
HOXD12P35452 KRR1P1-201ENST00000419430 803 ntBASIC5.22□□□□□ -1.57
HOXD12P35452 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD12P35452 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD12P35452 VDAC1P6-201ENST00000430062 855 ntBASIC5.22□□□□□ -1.57
HOXD12P35452 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXD12P35452 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD12P35452 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXD12P35452 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD12P35452 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD12P35452 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXD12P35452 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD12P35452 NAP1L1P3-201ENST00000462291 880 ntBASIC5.22□□□□□ -1.57
HOXD12P35452 PSAT1P4-201ENST00000466500 526 ntBASIC5.22□□□□□ -1.57
HOXD12P35452 RN7SL481P-201ENST00000477764 299 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms