Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VAMP1P23763 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VAMP1P23763 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.78□□□□□ -1.48
VAMP1P23763 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.78□□□□□ -1.48
VAMP1P23763 AC074141.1-201ENST00000588129 2995 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VAMP1P23763 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 RN7SKP72-201ENST00000362327 292 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 Y_RNA.402-201ENST00000383972 102 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 Y_RNA.450-201ENST00000384198 113 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 MIR654-201ENST00000385199 81 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
VAMP1P23763 CYB5AP4-201ENST00000396692 399 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 CIR1P3-201ENST00000405137 479 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 RNU6-516P-201ENST00000411381 104 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 MTND3P17-201ENST00000416968 344 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 RPL7AP72-201ENST00000417266 768 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 CHIAP3-201ENST00000423668 1133 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 AP003385.1-201ENST00000426387 893 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 AC073900.1-201ENST00000429766 776 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 PSMD10P2-201ENST00000432890 672 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 AL021939.1-201ENST00000441868 886 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC5.78□□□□□ -1.48
VAMP1P23763 RPS29P5-201ENST00000452777 171 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 AC027673.1-201ENST00000456245 405 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 NDUFA5P5-201ENST00000468361 342 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 RPL15P21-201ENST00000495592 567 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 PRDX4P1-201ENST00000507189 574 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC5.78□□□□□ -1.48
VAMP1P23763 ARL2BPP6-201ENST00000512757 439 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 RNU6-528P-201ENST00000516926 100 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.78□□□□□ -1.48
VAMP1P23763 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC5.78□□□□□ -1.48
VAMP1P23763 AC011979.2-201ENST00000527568 352 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.78□□□□□ -1.48
VAMP1P23763 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.78□□□□□ -1.48
VAMP1P23763 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.78□□□□□ -1.48
VAMP1P23763 AC074032.1-202ENST00000552815 467 ntTSL 3 BASIC5.78□□□□□ -1.48
VAMP1P23763 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.78□□□□□ -1.48
VAMP1P23763 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.78□□□□□ -1.48
VAMP1P23763 RN7SL667P-201ENST00000582817 298 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 EIF1-207ENST00000591776 797 ntTSL 4 BASIC5.78□□□□□ -1.48
VAMP1P23763 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC5.78□□□□□ -1.48
VAMP1P23763 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC5.78□□□□□ -1.48
VAMP1P23763 AC022239.4-201ENST00000602626 504 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.78□□□□□ -1.48
VAMP1P23763 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VAMP1P23763 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC5.78□□□□□ -1.48
VAMP1P23763 OR1N1-202ENST00000619659 939 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 AC012150.2-201ENST00000621300 544 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 AP006248.2-201ENST00000623309 592 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC5.78□□□□□ -1.48
VAMP1P23763 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.78□□□□□ -1.48
VAMP1P23763 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 AC004158.1-201ENST00000564508 4319 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 LINC01963-201ENST00000562038 3148 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 EEF1A1P22-201ENST00000559385 1380 ntBASIC5.78□□□□□ -1.48
VAMP1P23763 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
VAMP1P23763 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VAMP1P23763 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
VAMP1P23763 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VAMP1P23763 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.77□□□□□ -1.49
VAMP1P23763 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VAMP1P23763 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
VAMP1P23763 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VAMP1P23763 SPIN2B-201ENST00000275988 1152 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VAMP1P23763 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
VAMP1P23763 RNU1-47P-201ENST00000362966 163 ntBASIC5.77□□□□□ -1.49
VAMP1P23763 RNU6-432P-201ENST00000384196 109 ntBASIC5.77□□□□□ -1.49
VAMP1P23763 MIR124-3-201ENST00000384866 87 ntBASIC5.77□□□□□ -1.49
VAMP1P23763 PSMA6P1-201ENST00000400275 741 ntBASIC5.77□□□□□ -1.49
VAMP1P23763 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.77□□□□□ -1.49
VAMP1P23763 MIR1277-201ENST00000408536 78 ntBASIC5.77□□□□□ -1.49
VAMP1P23763 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.77□□□□□ -1.49
VAMP1P23763 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.77□□□□□ -1.49
VAMP1P23763 BRWD1P3-201ENST00000428816 390 ntBASIC5.77□□□□□ -1.49
VAMP1P23763 MTND1P2-201ENST00000430604 821 ntBASIC5.77□□□□□ -1.49
VAMP1P23763 RPL26P34-201ENST00000431005 451 ntBASIC5.77□□□□□ -1.49
VAMP1P23763 MTCO2P11-201ENST00000431069 680 ntBASIC5.77□□□□□ -1.49
VAMP1P23763 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.77□□□□□ -1.49
VAMP1P23763 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.77□□□□□ -1.49
VAMP1P23763 FTH1P1-201ENST00000437933 532 ntBASIC5.77□□□□□ -1.49
VAMP1P23763 H3F3BP1-201ENST00000440551 403 ntBASIC5.77□□□□□ -1.49
VAMP1P23763 SNX18P9-201ENST00000440580 835 ntBASIC5.77□□□□□ -1.49
VAMP1P23763 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC5.77□□□□□ -1.49
VAMP1P23763 AL512326.1-201ENST00000443050 721 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms