Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC090948.2-201ENST00000607363 564 ntBASIC3.6□□□□□ -1.83
CCL1P22362 AC019193.2-201ENST00000610012 634 ntBASIC3.6□□□□□ -1.83
CCL1P22362 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL1P22362 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL1P22362 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL1P22362 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.6□□□□□ -1.83
CCL1P22362 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL1P22362 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL1P22362 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCL1P22362 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCL1P22362 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
CCL1P22362 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL1P22362 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CCL1P22362 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCL1P22362 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL1P22362 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL1P22362 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL1P22362 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL1P22362 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL1P22362 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL1P22362 RNA5SP505-201ENST00000364748 108 ntBASIC3.59□□□□□ -1.83
CCL1P22362 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL1P22362 RNA5SP332-201ENST00000391063 115 ntBASIC3.59□□□□□ -1.83
CCL1P22362 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.59□□□□□ -1.83
CCL1P22362 ELOCP19-201ENST00000411919 318 ntBASIC3.59□□□□□ -1.83
CCL1P22362 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL1P22362 PGBD4P8-201ENST00000412993 562 ntBASIC3.59□□□□□ -1.83
CCL1P22362 AL139128.1-201ENST00000413921 941 ntBASIC3.59□□□□□ -1.83
CCL1P22362 RPL6P29-201ENST00000414863 865 ntBASIC3.59□□□□□ -1.83
CCL1P22362 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.59□□□□□ -1.83
CCL1P22362 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL1P22362 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL1P22362 RPS29P17-201ENST00000430795 166 ntBASIC3.59□□□□□ -1.83
CCL1P22362 RPL12P46-201ENST00000436610 195 ntBASIC3.59□□□□□ -1.83
CCL1P22362 AL138878.2-201ENST00000440581 1241 ntBASIC3.59□□□□□ -1.83
CCL1P22362 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.59□□□□□ -1.83
CCL1P22362 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL1P22362 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL1P22362 CLIC4P1-201ENST00000453177 535 ntBASIC3.59□□□□□ -1.83
CCL1P22362 AL354710.1-201ENST00000453641 246 ntBASIC3.59□□□□□ -1.83
CCL1P22362 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL1P22362 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.59□□□□□ -1.83
CCL1P22362 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCL1P22362 MTND2P28-201ENST00000457540 1044 ntBASIC3.59□□□□□ -1.83
CCL1P22362 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL1P22362 RPL23AP24-201ENST00000458203 385 ntBASIC3.59□□□□□ -1.83
CCL1P22362 AC109327.1-201ENST00000471666 403 ntBASIC3.59□□□□□ -1.83
CCL1P22362 AC008958.1-201ENST00000511047 682 ntBASIC3.59□□□□□ -1.83
CCL1P22362 KCTD9P2-201ENST00000512203 1013 ntBASIC3.59□□□□□ -1.83
CCL1P22362 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL1P22362 AC105233.3-201ENST00000531125 744 ntBASIC3.59□□□□□ -1.83
CCL1P22362 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL1P22362 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
CCL1P22362 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL1P22362 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL1P22362 AC079171.1-201ENST00000568788 914 ntBASIC3.59□□□□□ -1.83
CCL1P22362 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL1P22362 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.59□□□□□ -1.83
CCL1P22362 MIR4715-201ENST00000584117 79 ntBASIC3.59□□□□□ -1.83
CCL1P22362 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.59□□□□□ -1.83
CCL1P22362 AC015722.2-201ENST00000622210 551 ntBASIC3.59□□□□□ -1.83
CCL1P22362 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCL1P22362 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CCL1P22362 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.59□□□□□ -1.84
CCL1P22362 MARK2P15-201ENST00000432204 2186 ntBASIC3.59□□□□□ -1.84
CCL1P22362 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.59□□□□□ -1.84
CCL1P22362 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
CCL1P22362 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCL1P22362 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CCL1P22362 AL133243.3-201ENST00000617415 3004 ntBASIC3.58□□□□□ -1.84
CCL1P22362 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCL1P22362 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCL1P22362 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCL1P22362 RNA5SP513-201ENST00000364648 118 ntBASIC3.58□□□□□ -1.84
CCL1P22362 RNU6-398P-201ENST00000384143 109 ntBASIC3.58□□□□□ -1.84
CCL1P22362 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.58□□□□□ -1.84
CCL1P22362 RPS27AP7-201ENST00000422792 455 ntBASIC3.58□□□□□ -1.84
CCL1P22362 TRGV7-201ENST00000427089 353 ntBASIC3.58□□□□□ -1.84
CCL1P22362 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL1P22362 HMGB3P22-202ENST00000451823 572 ntBASIC3.58□□□□□ -1.84
CCL1P22362 AC009963.2-201ENST00000453431 138 ntBASIC3.58□□□□□ -1.84
CCL1P22362 RN7SL610P-201ENST00000463845 291 ntBASIC3.58□□□□□ -1.84
CCL1P22362 RPL31P61-201ENST00000496160 376 ntBASIC3.58□□□□□ -1.84
CCL1P22362 AC093824.1-201ENST00000508796 343 ntBASIC3.58□□□□□ -1.84
CCL1P22362 RNU7-143P-201ENST00000516781 65 ntBASIC3.58□□□□□ -1.84
CCL1P22362 MTCYBP19-201ENST00000517463 1124 ntBASIC3.58□□□□□ -1.84
CCL1P22362 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL1P22362 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.58□□□□□ -1.84
CCL1P22362 MTND1P6-201ENST00000523621 946 ntBASIC3.58□□□□□ -1.84
CCL1P22362 AC068446.3-201ENST00000555285 382 ntBASIC3.58□□□□□ -1.84
CCL1P22362 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL1P22362 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.58□□□□□ -1.84
CCL1P22362 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.58□□□□□ -1.84
CCL1P22362 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCL1P22362 AL161729.3-201ENST00000603533 673 ntBASIC3.58□□□□□ -1.84
CCL1P22362 AC128687.2-201ENST00000609657 566 ntBASIC3.58□□□□□ -1.84
CCL1P22362 Mico1.1-201ENST00000611698 204 ntBASIC3.58□□□□□ -1.84
CCL1P22362 AC100827.5-201ENST00000615883 426 ntBASIC3.58□□□□□ -1.84
CCL1P22362 AC022960.2-201ENST00000616300 666 ntBASIC3.58□□□□□ -1.84
CCL1P22362 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms