Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL159169.3-201ENST00000608871 561 ntBASIC5.36□□□□□ -1.55
COL5A2P05997 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.36□□□□□ -1.55
COL5A2P05997 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.36□□□□□ -1.55
COL5A2P05997 AC010300.1-201ENST00000600671 5134 ntBASIC5.36□□□□□ -1.55
COL5A2P05997 LINC00561-201ENST00000565815 2738 ntBASIC5.36□□□□□ -1.55
COL5A2P05997 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL5A2P05997 AC005261.2-201ENST00000593427 4258 ntBASIC5.36□□□□□ -1.55
COL5A2P05997 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
COL5A2P05997 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL5A2P05997 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
COL5A2P05997 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL5A2P05997 U1.1-201ENST00000384101 164 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.35□□□□□ -1.55
COL5A2P05997 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 UBTFL3-201ENST00000418934 1024 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 RPS27AP15-201ENST00000447672 466 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 PRDX3P3-201ENST00000447765 522 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 AC007967.1-201ENST00000455422 1159 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 UBTFL6-201ENST00000477929 1024 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 UBE2CP3-201ENST00000502715 450 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.35□□□□□ -1.55
COL5A2P05997 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.35□□□□□ -1.55
COL5A2P05997 AC091516.1-201ENST00000549191 703 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 AF131215.7-201ENST00000602443 707 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 AC005344.1-201ENST00000613391 459 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 AC009950.2-201ENST00000636548 183 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.35□□□□□ -1.55
COL5A2P05997 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL5A2P05997 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.35□□□□□ -1.55
COL5A2P05997 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
COL5A2P05997 AC083837.1-201ENST00000565297 2994 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 AC004656.1-201ENST00000568479 4951 ntBASIC5.35□□□□□ -1.55
COL5A2P05997 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL5A2P05997 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL5A2P05997 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.34□□□□□ -1.55
COL5A2P05997 RNA5SP399-201ENST00000364003 117 ntBASIC5.34□□□□□ -1.55
COL5A2P05997 MIR34B-201ENST00000385076 84 ntBASIC5.34□□□□□ -1.55
COL5A2P05997 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL5A2P05997 AL161631.1-201ENST00000417933 486 ntBASIC5.34□□□□□ -1.55
COL5A2P05997 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.34□□□□□ -1.55
COL5A2P05997 VTI1BP4-201ENST00000427516 527 ntBASIC5.34□□□□□ -1.55
COL5A2P05997 RPS26P2-201ENST00000440331 348 ntBASIC5.34□□□□□ -1.55
COL5A2P05997 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.34□□□□□ -1.55
COL5A2P05997 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.34□□□□□ -1.55
COL5A2P05997 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.34□□□□□ -1.55
COL5A2P05997 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.34□□□□□ -1.55
COL5A2P05997 AC026616.1-201ENST00000523157 525 ntBASIC5.34□□□□□ -1.55
COL5A2P05997 AC093014.1-201ENST00000548926 724 ntBASIC5.34□□□□□ -1.55
COL5A2P05997 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.34□□□□□ -1.55
COL5A2P05997 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.34□□□□□ -1.55
COL5A2P05997 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
COL5A2P05997 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL5A2P05997 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
COL5A2P05997 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL5A2P05997 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
COL5A2P05997 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL5A2P05997 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL5A2P05997 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL5A2P05997 AC073346.2-201ENST00000624724 2058 ntBASIC5.34□□□□□ -1.55
COL5A2P05997 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
COL5A2P05997 AL133268.1-201ENST00000405676 1401 ntBASIC5.34□□□□□ -1.56
COL5A2P05997 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
COL5A2P05997 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.34□□□□□ -1.56
COL5A2P05997 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.33□□□□□ -1.56
COL5A2P05997 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL5A2P05997 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL5A2P05997 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
COL5A2P05997 AC007068.1-201ENST00000396690 844 ntBASIC5.33□□□□□ -1.56
COL5A2P05997 RPL36AP10-201ENST00000421785 322 ntBASIC5.33□□□□□ -1.56
COL5A2P05997 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.33□□□□□ -1.56
COL5A2P05997 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL5A2P05997 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.33□□□□□ -1.56
COL5A2P05997 RNA5SP179-201ENST00000517284 121 ntBASIC5.33□□□□□ -1.56
COL5A2P05997 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.33□□□□□ -1.56
COL5A2P05997 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.33□□□□□ -1.56
COL5A2P05997 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.33□□□□□ -1.56
COL5A2P05997 AL442067.2-201ENST00000614033 363 ntBASIC5.33□□□□□ -1.56
COL5A2P05997 AC073530.2-201ENST00000623987 261 ntBASIC5.33□□□□□ -1.56
COL5A2P05997 AF001550.2-201ENST00000636643 217 ntBASIC5.33□□□□□ -1.56
COL5A2P05997 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
COL5A2P05997 AC097461.1-201ENST00000568928 2821 ntBASIC5.33□□□□□ -1.56
COL5A2P05997 AC112198.2-201ENST00000426589 6996 ntBASIC5.33□□□□□ -1.56
COL5A2P05997 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
COL5A2P05997 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.33□□□□□ -1.56
COL5A2P05997 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL5A2P05997 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.33□□□□□ -1.56
COL5A2P05997 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.33□□□□□ -1.56
COL5A2P05997 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.33□□□□□ -1.56
COL5A2P05997 HMGB3P19-201ENST00000403971 560 ntBASIC5.32□□□□□ -1.56
COL5A2P05997 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.32□□□□□ -1.56
COL5A2P05997 AC092647.1-201ENST00000420654 287 ntBASIC5.32□□□□□ -1.56
COL5A2P05997 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.32□□□□□ -1.56
COL5A2P05997 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.32□□□□□ -1.56
COL5A2P05997 RNU6-775P-201ENST00000459318 96 ntBASIC5.32□□□□□ -1.56
COL5A2P05997 AC087369.1-201ENST00000520775 996 ntBASIC5.32□□□□□ -1.56
COL5A2P05997 AC022784.5-201ENST00000522241 437 ntBASIC5.32□□□□□ -1.56
COL5A2P05997 AC022616.2-201ENST00000523185 300 ntBASIC5.32□□□□□ -1.56
COL5A2P05997 AL359219.2-201ENST00000555184 348 ntBASIC5.32□□□□□ -1.56
COL5A2P05997 VN1R92P-201ENST00000598511 928 ntBASIC5.32□□□□□ -1.56
COL5A2P05997 QTRT1P1-201ENST00000604344 1078 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms