Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL365400.1-201ENST00000431854 640 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.32□□□□□ -1.4
PDGFAP04085 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFAP04085 AC063943.1-201ENST00000465434 453 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.32□□□□□ -1.4
PDGFAP04085 MTND5P5-201ENST00000503764 376 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 AC095057.1-201ENST00000507583 168 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFAP04085 AC018797.1-201ENST00000510791 255 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFAP04085 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFAP04085 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 TOMM20P1-201ENST00000534518 427 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFAP04085 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.32□□□□□ -1.4
PDGFAP04085 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFAP04085 ACTG1P15-201ENST00000570019 1063 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFAP04085 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFAP04085 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFAP04085 AL161729.3-201ENST00000603533 673 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 AC007255.2-201ENST00000604053 631 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 Y_RNA.812-201ENST00000610788 101 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 Y_RNA.784-201ENST00000613803 101 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 Y_RNA.787-201ENST00000616522 101 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 Y_RNA.780-201ENST00000617336 101 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 Y_RNA.801-201ENST00000619005 101 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 AC005618.1-201ENST00000606901 3148 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFAP04085 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFAP04085 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PDGFAP04085 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PDGFAP04085 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PDGFAP04085 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFAP04085 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.31□□□□□ -1.4
PDGFAP04085 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 FRG1BP-201ENST00000278882 761 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.31□□□□□ -1.4
PDGFAP04085 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 RNU6-853P-201ENST00000364306 107 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDGFAP04085 RNU6-441P-201ENST00000384545 106 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 AL356432.1-201ENST00000405809 419 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 RNA5SP431-201ENST00000410312 120 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 PDCL2P1-201ENST00000419302 352 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 AL590128.1-201ENST00000433407 286 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 NDUFA5P4-201ENST00000436704 385 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFAP04085 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFAP04085 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFAP04085 RN7SL160P-201ENST00000468558 284 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFAP04085 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFAP04085 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.31□□□□□ -1.4
PDGFAP04085 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFAP04085 RNU6-835P-201ENST00000516974 104 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 RNA5SP278-201ENST00000517055 102 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFAP04085 AC120036.3-201ENST00000517826 292 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFAP04085 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFAP04085 AC078814.3-201ENST00000553036 491 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFAP04085 AC011921.2-201ENST00000589465 152 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 AL953862.2-201ENST00000603089 820 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.31□□□□□ -1.4
PDGFAP04085 HSPE1P14-201ENST00000605812 302 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 RN7SL261P-201ENST00000613441 282 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 AL352984.2-202ENST00000613699 155 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 AL160413.1-201ENST00000622780 310 ntBASIC6.31□□□□□ -1.4
PDGFAP04085 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.31□□□□□ -1.4
PDGFAP04085 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms