Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RPL37P3-201ENST00000456825 293 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 AC245028.2-201ENST00000458673 253 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 SNORD11.1-201ENST00000459482 85 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM38O00635 AC073522.1-201ENST00000483312 377 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM38O00635 IGBP1P4-201ENST00000503202 879 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 AC020699.1-201ENST00000505161 445 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM38O00635 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM38O00635 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM38O00635 EIF3KP3-201ENST00000514461 639 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.29□□□□□ -1.56
TRIM38O00635 AP000676.2-201ENST00000529711 301 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 AC027369.5-201ENST00000533838 755 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM38O00635 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.29□□□□□ -1.56
TRIM38O00635 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM38O00635 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 H3F3BP2-201ENST00000583907 357 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
TRIM38O00635 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM38O00635 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 AC006272.2-201ENST00000594725 163 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 AC005252.1-201ENST00000604518 1063 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 AC002487.1-201ENST00000604565 994 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 AL365400.2-201ENST00000605604 902 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 VN1R7P-201ENST00000619242 903 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 AP000756.2-201ENST00000624168 2567 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM38O00635 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM38O00635 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
TRIM38O00635 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TRIM38O00635 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
TRIM38O00635 MTND4P34-201ENST00000572715 1371 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 AL034549.2-201ENST00000618285 3373 ntBASIC5.29□□□□□ -1.56
TRIM38O00635 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM38O00635 AL138820.1-201ENST00000617901 5305 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM38O00635 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TRIM38O00635 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM38O00635 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
TRIM38O00635 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM38O00635 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
TRIM38O00635 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM38O00635 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM38O00635 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM38O00635 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TRIM38O00635 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TRIM38O00635 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM38O00635 RNU1-87P-201ENST00000363727 170 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM38O00635 Y_RNA.505-201ENST00000384489 102 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 RPL21P67-201ENST00000402896 478 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM38O00635 AL139128.1-201ENST00000413921 941 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM38O00635 AL449283.1-202ENST00000418249 604 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC114814.2-201ENST00000419195 485 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC027644.1-201ENST00000419595 298 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC093162.1-201ENST00000419682 124 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 GAPDHP49-201ENST00000421421 961 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM38O00635 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM38O00635 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
TRIM38O00635 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM38O00635 AC092809.1-201ENST00000441469 474 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 OR10R1P-201ENST00000441524 1141 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AL591719.1-201ENST00000444669 744 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 Z80107.2-201ENST00000445127 392 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AL672138.1-201ENST00000450604 1015 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM38O00635 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM38O00635 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM38O00635 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM38O00635 AC023424.1-201ENST00000496058 459 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM38O00635 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM38O00635 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM38O00635 HMGN1P9-201ENST00000515212 298 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM38O00635 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM38O00635 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM38O00635 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.28□□□□□ -1.56
TRIM38O00635 HMGB1P23-201ENST00000518743 568 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AP004607.2-201ENST00000533949 322 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM38O00635 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM38O00635 AC145350.1-201ENST00000567426 208 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM38O00635 AP001542.2-201ENST00000593141 364 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC022022.2-201ENST00000602989 360 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms