Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ABCA3Q99758 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.39□□□□□ -1.55
ABCA3Q99758 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ABCA3Q99758 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.39□□□□□ -1.55
ABCA3Q99758 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.39□□□□□ -1.55
ABCA3Q99758 SNORD66.1-201ENST00000391230 76 ntBASIC5.39□□□□□ -1.55
ABCA3Q99758 HSFY1P1-201ENST00000423928 1178 ntBASIC5.39□□□□□ -1.55
ABCA3Q99758 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.39□□□□□ -1.55
ABCA3Q99758 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.39□□□□□ -1.55
ABCA3Q99758 AC008481.1-201ENST00000463278 396 ntBASIC5.39□□□□□ -1.55
ABCA3Q99758 SETP6-201ENST00000479329 568 ntBASIC5.39□□□□□ -1.55
ABCA3Q99758 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.39□□□□□ -1.55
ABCA3Q99758 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.39□□□□□ -1.55
ABCA3Q99758 CDH12P2-201ENST00000504393 298 ntBASIC5.39□□□□□ -1.55
ABCA3Q99758 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.39□□□□□ -1.55
ABCA3Q99758 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ABCA3Q99758 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.39□□□□□ -1.55
ABCA3Q99758 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.39□□□□□ -1.55
ABCA3Q99758 AC090286.3-201ENST00000573133 187 ntBASIC5.39□□□□□ -1.55
ABCA3Q99758 AC243654.2-201ENST00000612843 443 ntBASIC5.39□□□□□ -1.55
ABCA3Q99758 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.39□□□□□ -1.55
ABCA3Q99758 MTND5P1-201ENST00000445440 1375 ntBASIC5.39□□□□□ -1.55
ABCA3Q99758 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ABCA3Q99758 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ABCA3Q99758 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ABCA3Q99758 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
ABCA3Q99758 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
ABCA3Q99758 RNU2-65P-201ENST00000410162 185 ntBASIC5.38□□□□□ -1.55
ABCA3Q99758 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.38□□□□□ -1.55
ABCA3Q99758 RPS27AP15-201ENST00000447672 466 ntBASIC5.38□□□□□ -1.55
ABCA3Q99758 HMGB3P16-201ENST00000508037 287 ntBASIC5.38□□□□□ -1.55
ABCA3Q99758 MIR5195-201ENST00000583555 115 ntBASIC5.38□□□□□ -1.55
ABCA3Q99758 AC008833.1-201ENST00000611633 691 ntBASIC5.38□□□□□ -1.55
ABCA3Q99758 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ABCA3Q99758 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
ABCA3Q99758 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ABCA3Q99758 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ABCA3Q99758 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ABCA3Q99758 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ABCA3Q99758 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.38□□□□□ -1.55
ABCA3Q99758 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.38□□□□□ -1.55
ABCA3Q99758 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.38□□□□□ -1.55
ABCA3Q99758 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.38□□□□□ -1.55
ABCA3Q99758 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ABCA3Q99758 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.37□□□□□ -1.55
ABCA3Q99758 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ABCA3Q99758 TCEA1P2-201ENST00000420496 906 ntBASIC5.37□□□□□ -1.55
ABCA3Q99758 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.37□□□□□ -1.55
ABCA3Q99758 PDSS1P2-201ENST00000449397 678 ntBASIC5.37□□□□□ -1.55
ABCA3Q99758 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.37□□□□□ -1.55
ABCA3Q99758 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.37□□□□□ -1.55
ABCA3Q99758 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.37□□□□□ -1.55
ABCA3Q99758 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.37□□□□□ -1.55
ABCA3Q99758 QTRT1P1-201ENST00000604344 1078 ntBASIC5.37□□□□□ -1.55
ABCA3Q99758 PCA3_2.1-201ENST00000612507 409 ntBASIC5.37□□□□□ -1.55
ABCA3Q99758 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.37□□□□□ -1.55
ABCA3Q99758 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.37□□□□□ -1.55
ABCA3Q99758 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.37□□□□□ -1.55
ABCA3Q99758 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ABCA3Q99758 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ABCA3Q99758 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ABCA3Q99758 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ABCA3Q99758 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ABCA3Q99758 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
ABCA3Q99758 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.37□□□□□ -1.55
ABCA3Q99758 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ABCA3Q99758 MIR490-201ENST00000384865 128 ntBASIC5.37□□□□□ -1.55
ABCA3Q99758 MIR34B-201ENST00000385076 84 ntBASIC5.37□□□□□ -1.55
ABCA3Q99758 PRELID3BP10-201ENST00000431957 584 ntBASIC5.37□□□□□ -1.55
ABCA3Q99758 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.37□□□□□ -1.55
ABCA3Q99758 CYCSP53-201ENST00000455540 265 ntBASIC5.37□□□□□ -1.55
ABCA3Q99758 AL133244.1-201ENST00000456007 258 ntBASIC5.37□□□□□ -1.55
ABCA3Q99758 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.37□□□□□ -1.55
ABCA3Q99758 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.37□□□□□ -1.55
ABCA3Q99758 RPS4XP10-201ENST00000465034 731 ntBASIC5.37□□□□□ -1.55
ABCA3Q99758 AC016550.3-201ENST00000515706 767 ntBASIC5.37□□□□□ -1.55
ABCA3Q99758 CYCSP30-201ENST00000546447 172 ntBASIC5.37□□□□□ -1.55
ABCA3Q99758 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ABCA3Q99758 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.37□□□□□ -1.55
ABCA3Q99758 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ABCA3Q99758 AC097461.1-201ENST00000568928 2821 ntBASIC5.36□□□□□ -1.55
ABCA3Q99758 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ABCA3Q99758 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ABCA3Q99758 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ABCA3Q99758 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ABCA3Q99758 PRO1804-201ENST00000623780 2050 ntBASIC5.36□□□□□ -1.55
ABCA3Q99758 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
ABCA3Q99758 Y_RNA.111-201ENST00000363248 100 ntBASIC5.36□□□□□ -1.55
ABCA3Q99758 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.36□□□□□ -1.55
ABCA3Q99758 Z97055.1-201ENST00000419730 712 ntBASIC5.36□□□□□ -1.55
ABCA3Q99758 RAD23BP3-201ENST00000454157 1152 ntBASIC5.36□□□□□ -1.55
ABCA3Q99758 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ABCA3Q99758 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.36□□□□□ -1.55
ABCA3Q99758 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.36□□□□□ -1.55
ABCA3Q99758 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.36□□□□□ -1.55
ABCA3Q99758 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.36□□□□□ -1.55
ABCA3Q99758 AL645927.2-201ENST00000618350 349 ntBASIC5.36□□□□□ -1.55
ABCA3Q99758 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.36□□□□□ -1.55
ABCA3Q99758 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.36□□□□□ -1.55
ABCA3Q99758 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms