Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AL096829.1-201ENST00000413677 457 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC092634.6-201ENST00000418558 192 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 MTCO3P1-205ENST00000422088 832 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 RPL12P12-201ENST00000424633 501 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC073335.1-201ENST00000427776 363 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 RPL7P56-201ENST00000429441 717 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 BTF3P10-201ENST00000433415 495 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 ATP5LP2-201ENST00000440646 311 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 BMS1P10-201ENST00000443754 1120 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 GDI2P2-201ENST00000445131 608 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 SLC31A1P1-201ENST00000451221 567 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 NF1P3-201ENST00000457709 450 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC074386.1-201ENST00000476560 767 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 MTCYBP17-201ENST00000503579 789 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 NDUFB4P2-201ENST00000509515 391 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 PRMT5P1-201ENST00000514351 598 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC027309.2-201ENST00000520566 192 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 DEFB131D-201ENST00000526803 184 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 RNU4ATAC-201ENST00000580972 127 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 FGF7P1-201ENST00000582820 288 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC005730.3-201ENST00000583067 366 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC008507.3-201ENST00000585753 472 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC020916.2-201ENST00000591242 360 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC079315.1-201ENST00000602952 623 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 RN7SL261P-201ENST00000613441 282 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC073488.3-201ENST00000631611 778 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AL034370.1-201ENST00000397254 1590 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 MTCO1P14-201ENST00000441695 1559 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 ASNSP1-204ENST00000641977 1664 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC020656.2-201ENST00000613291 5309 ntBASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTCHD1Q96NR3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 RBMY1HP-201ENST00000382759 1389 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 TMSB4XP4-201ENST00000323496 618 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 Y_RNA.97-201ENST00000363094 102 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 MIR130B-202ENST00000385018 82 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC004386.1-201ENST00000393214 761 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 CCNG1P1-201ENST00000406783 885 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC245096.1-201ENST00000413104 546 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC083875.1-201ENST00000419509 405 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AL139413.1-201ENST00000421309 217 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC007562.1-201ENST00000421819 517 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 NIPA2P1-201ENST00000426223 976 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 RPL37P21-201ENST00000435890 276 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC023274.2-201ENST00000445264 521 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 FTLP8-201ENST00000446770 267 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 TPT1P14-201ENST00000448018 505 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 USP9YP12-201ENST00000450481 570 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 PPIAP27-201ENST00000453800 265 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC112187.1-201ENST00000455837 479 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC091564.1-201ENST00000464563 479 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AL161747.1-201ENST00000480068 358 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 PTGES3P3-201ENST00000511479 482 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 RNU6-583P-201ENST00000516012 92 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 RNU6-507P-201ENST00000516045 100 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 RN7SKP238-201ENST00000516483 249 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 RNU6-430P-201ENST00000517078 107 ntBASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.73□□□□□ -1.49
PTCHD1Q96NR3 IGKV3D-25-201ENST00000519599 235 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms