Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC008565.1-201ENST00000509046 885 ntBASIC4.76□□□□□ -1.65
VMP1Q96GC9 SNORA76.2-201ENST00000517095 137 ntBASIC4.76□□□□□ -1.65
VMP1Q96GC9 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 AC007424.1-203ENST00000554613 687 ntBASIC4.76□□□□□ -1.65
VMP1Q96GC9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 AL021368.1-201ENST00000607490 540 ntBASIC4.76□□□□□ -1.65
VMP1Q96GC9 OR2BH1P-201ENST00000608850 864 ntBASIC4.76□□□□□ -1.65
VMP1Q96GC9 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 AC093799.2-201ENST00000610062 578 ntBASIC4.76□□□□□ -1.65
VMP1Q96GC9 AC078899.5-201ENST00000612475 178 ntBASIC4.76□□□□□ -1.65
VMP1Q96GC9 AC004943.3-201ENST00000624116 600 ntBASIC4.76□□□□□ -1.65
VMP1Q96GC9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VMP1Q96GC9 AC008725.1-201ENST00000605123 2263 ntBASIC4.76□□□□□ -1.65
VMP1Q96GC9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VMP1Q96GC9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VMP1Q96GC9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VMP1Q96GC9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.76□□□□□ -1.65
VMP1Q96GC9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VMP1Q96GC9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VMP1Q96GC9 RNU6-543P-201ENST00000362576 108 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VMP1Q96GC9 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VMP1Q96GC9 AL589647.1-201ENST00000402485 466 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 AL390316.1-201ENST00000406279 553 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC092745.2-202ENST00000411880 369 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VMP1Q96GC9 FABP7P2-201ENST00000429946 379 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 HMGB1P48-201ENST00000446155 598 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC091180.1-201ENST00000462104 372 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 RPS20P21-201ENST00000466859 343 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VMP1Q96GC9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 RPL7L1P13-201ENST00000511702 739 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 RPL23AP53-201ENST00000521854 457 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 AP000676.2-201ENST00000529711 301 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC139103.1-201ENST00000534696 1030 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC113194.1-201ENST00000606037 500 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 BX323046.1-201ENST00000610145 535 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC026368.1-201ENST00000614934 690 ntBASIC4.75□□□□□ -1.65
VMP1Q96GC9 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VMP1Q96GC9 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VMP1Q96GC9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VMP1Q96GC9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VMP1Q96GC9 EIF2AP4-201ENST00000424793 1781 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VMP1Q96GC9 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.74□□□□□ -1.65
VMP1Q96GC9 RNA5SP455-201ENST00000365190 119 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.74□□□□□ -1.65
VMP1Q96GC9 RNU6-1005P-201ENST00000384519 107 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 SNORA66-201ENST00000384792 133 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 AL645733.1-201ENST00000402250 217 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 Z97832.1-201ENST00000402490 328 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 PRELID3BP11-201ENST00000414230 479 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.74□□□□□ -1.65
VMP1Q96GC9 RPL31P45-201ENST00000419532 356 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 E2F6P2-201ENST00000420708 748 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 AC023141.6-201ENST00000429418 337 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 ETF1P3-201ENST00000430422 1160 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.74□□□□□ -1.65
VMP1Q96GC9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.74□□□□□ -1.65
VMP1Q96GC9 AL354714.3-201ENST00000447284 493 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.74□□□□□ -1.65
VMP1Q96GC9 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VMP1Q96GC9 MTND2P30-201ENST00000456663 382 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 RPL7AP28-201ENST00000464513 571 ntBASIC4.74□□□□□ -1.65
VMP1Q96GC9 RPL21P71-201ENST00000465598 459 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms