Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 RNU6-553P-201ENST00000364047 96 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 RPL7P53-201ENST00000421245 739 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC006366.1-201ENST00000422002 759 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 RPS4XP16-201ENST00000427198 791 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC005033.1-201ENST00000428904 813 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 MTND1P32-201ENST00000433043 938 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 CEACAMP7-201ENST00000444105 496 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AL645937.3-201ENST00000453647 936 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC093899.1-201ENST00000457984 376 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX11Q96FC9 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 RPS23P1-201ENST00000491662 432 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC231760.1-201ENST00000498002 260 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC021146.7-201ENST00000509604 775 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 RNU6-720P-201ENST00000516363 108 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC022832.1-201ENST00000530718 645 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX11Q96FC9 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 PCNPP1-201ENST00000552501 511 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 MIR7853-201ENST00000584820 132 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 VN1R83P-201ENST00000595685 445 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC010738.1-201ENST00000604970 987 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 AL392112.1-201ENST00000605115 829 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC244107.2-201ENST00000611773 76 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 uc_338.7-201ENST00000621834 124 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC015804.1-201ENST00000622935 435 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC074101.1-201ENST00000637861 241 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AC027514.1-201ENST00000588561 1603 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
DDX11Q96FC9 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 AL450345.1-202ENST00000605741 3881 ntBASIC6.31□□□□□ -1.4
DDX11Q96FC9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX11Q96FC9 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX11Q96FC9 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
DDX11Q96FC9 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
DDX11Q96FC9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
DDX11Q96FC9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DDX11Q96FC9 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
DDX11Q96FC9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DDX11Q96FC9 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.3□□□□□ -1.4
DDX11Q96FC9 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
DDX11Q96FC9 U8.4-201ENST00000363626 134 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.3□□□□□ -1.4
DDX11Q96FC9 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DDX11Q96FC9 RNU6-31P-201ENST00000384388 108 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 SNORA67-201ENST00000384423 137 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 MIR765-201ENST00000390226 114 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 RNU6-1320P-201ENST00000390838 107 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 RNU6-1269P-201ENST00000391139 107 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 HMGB1P10-201ENST00000395823 563 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.3□□□□□ -1.4
DDX11Q96FC9 GTF2IP2-201ENST00000424290 697 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 RAC1P8-201ENST00000427086 527 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.3□□□□□ -1.4
DDX11Q96FC9 NEK4P1-201ENST00000433383 879 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 CASP3P1-201ENST00000446037 609 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.3□□□□□ -1.4
DDX11Q96FC9 AL035090.1-201ENST00000454835 332 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC6.3□□□□□ -1.4
DDX11Q96FC9 RNU6-599P-201ENST00000459383 107 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 RNU6-1193P-201ENST00000459461 107 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
DDX11Q96FC9 AC092754.1-201ENST00000472975 479 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.3□□□□□ -1.4
DDX11Q96FC9 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
DDX11Q96FC9 AC119751.1-201ENST00000513357 765 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 NDUFB4P12-201ENST00000513465 390 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 SCARNA16.4-201ENST00000516956 187 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 RNA5SP230-201ENST00000517039 122 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.3□□□□□ -1.4
DDX11Q96FC9 HMGB1P40-201ENST00000525121 540 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.3□□□□□ -1.4
DDX11Q96FC9 RSL24D1P11-201ENST00000591045 491 ntBASIC6.3□□□□□ -1.4
DDX11Q96FC9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC6.3□□□□□ -1.4
DDX11Q96FC9 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.3□□□□□ -1.4
DDX11Q96FC9 AP002906.1-201ENST00000603405 233 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms