Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VRK3Q8IV63 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VRK3Q8IV63 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC004158.1-201ENST00000564508 4319 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VRK3Q8IV63 RN7SKP162-201ENST00000363605 345 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 PGBD4P8-201ENST00000412993 562 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 MTCYBP38-201ENST00000417160 1123 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC027644.1-201ENST00000419595 298 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC009263.1-201ENST00000441193 1239 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 GAPDHP25-201ENST00000447061 1001 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC011225.1-201ENST00000457751 369 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AL133445.1-201ENST00000467051 452 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC126182.1-201ENST00000478134 357 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC113430.1-201ENST00000506872 718 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 IGKV2-18-201ENST00000522607 343 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 HMGB1P40-201ENST00000525121 540 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AL139174.1-201ENST00000531489 886 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC016957.1-201ENST00000534895 309 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 AP000619.3-201ENST00000535634 1127 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 YWHABP2-201ENST00000540201 713 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 MIR7853-201ENST00000584820 132 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC022146.1-201ENST00000595307 847 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC009027.1-201ENST00000604510 479 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 AL592148.2-201ENST00000612210 372 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 Z99129.1-201ENST00000612510 255 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VRK3Q8IV63 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VRK3Q8IV63 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
VRK3Q8IV63 AC090220.1-201ENST00000593078 1699 ntBASIC5.24□□□□□ -1.57
VRK3Q8IV63 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
VRK3Q8IV63 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 AC109446.4-201ENST00000623235 2755 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VRK3Q8IV63 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK3Q8IV63 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VRK3Q8IV63 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 AL672167.1-206ENST00000356293 943 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 RNU4-21P-201ENST00000362802 126 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 U3.4-201ENST00000363352 213 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 snoZ40.1-201ENST00000364540 72 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VRK3Q8IV63 RNU6-1200P-201ENST00000384162 107 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 RNU6-549P-201ENST00000384433 107 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 DNAJC19P6-201ENST00000401853 280 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 AL079342.2-201ENST00000403367 482 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 AL391361.1-201ENST00000405580 489 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 NPM1P4-201ENST00000414095 812 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 RPL7L1P9-201ENST00000431298 745 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 AL139415.2-201ENST00000431968 163 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 AL591503.2-201ENST00000442314 1005 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 FGF7P6-202ENST00000451282 293 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 AC027673.1-201ENST00000456245 405 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 RPS4XP1-201ENST00000482189 787 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.23□□□□□ -1.57
VRK3Q8IV63 AC096751.1-202ENST00000502691 1067 ntBASIC5.23□□□□□ -1.57
VRK3Q8IV63 PGBD4P4-201ENST00000509673 613 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms