Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL589823.1-201ENST00000429577 183 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 GTF2IP3-201ENST00000433887 494 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 MTCO2P3-201ENST00000442543 421 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC073648.4-201ENST00000442655 781 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AL031584.1-201ENST00000447169 754 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 CCRL1P1-201ENST00000449542 1053 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC008280.2-201ENST00000455473 307 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 RPL6P9-201ENST00000466502 859 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC004815.1-201ENST00000484185 331 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AL117351.2-201ENST00000513571 157 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC138938.1-201ENST00000515431 782 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 RNU6-1028P-201ENST00000517164 93 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC010306.1-201ENST00000523223 1117 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 OR8I1P-201ENST00000529291 931 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC087477.6-201ENST00000559595 843 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AL158042.1-201ENST00000605338 460 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AL121895.2-201ENST00000619558 447 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AC015871.5-202ENST00000623252 701 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 AP000676.3-201ENST00000623299 569 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZNF549Q6P9A3 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AC109780.1-201ENST00000451768 1344 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 DDX18P5-201ENST00000534547 1306 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 SNORD56.4-201ENST00000363883 71 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 Y_RNA.436-201ENST00000384097 102 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 Z97832.1-201ENST00000402490 328 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AL021331.1-201ENST00000402817 582 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 RPL6P5-201ENST00000445678 828 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 MTND6P5-201ENST00000448266 512 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AL157884.3-201ENST00000448273 1184 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AC073850.1-201ENST00000449243 255 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 BUD31P2-201ENST00000449374 300 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AC073387.1-201ENST00000453261 709 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AC011037.1-201ENST00000483964 558 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 RPS3AP22-201ENST00000488297 769 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 RN7SL558P-201ENST00000497468 299 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 SUMO1P1-201ENST00000497904 306 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AC140172.1-201ENST00000502928 141 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 MTND4P2-201ENST00000507767 1203 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AC110775.1-201ENST00000513721 462 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 AC092593.2-201ENST00000513866 913 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 Y_RNA.719-201ENST00000517156 106 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 RNU6-709P-201ENST00000517257 104 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 FTH1P11-201ENST00000517577 551 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 GCSHP4-201ENST00000538792 439 ntBASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.81□□□□□ -1.64
ZNF549Q6P9A3 CBX3P2-202ENST00000583365 535 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms