Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 RNA5SP507-201ENST00000363603 121 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 MIR130A-201ENST00000385274 89 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AL645927.1-201ENST00000396783 406 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AL390774.1-201ENST00000411924 246 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC211486.3-201ENST00000412694 621 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 RPL23AP27-201ENST00000415161 451 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC234781.2-201ENST00000426370 994 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AL031736.2-201ENST00000426573 787 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 OR52E3P-201ENST00000452083 936 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 RPS23P2-201ENST00000463671 415 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 LINC00888-204ENST00000487386 421 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 RN7SL808P-201ENST00000496066 299 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 RPS17P5-201ENST00000498293 408 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 RPF2P2-201ENST00000504693 896 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 MTCO1P30-201ENST00000515244 580 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC137627.1-201ENST00000545761 289 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 CASC16-202ENST00000563844 610 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 NF1P5-201ENST00000588287 448 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC012616.1-201ENST00000600294 197 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC018809.2-201ENST00000602436 3823 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 Z99497.2-201ENST00000603634 310 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC133552.5-201ENST00000604266 540 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC024940.4-201ENST00000605507 246 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AL118522.2-201ENST00000616045 615 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC243756.2-201ENST00000618406 463 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC073348.1-201ENST00000623002 331 ntBASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CCDC144BQ3MJ40 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 LINC01963-201ENST00000562038 3148 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 XPOTP1-201ENST00000443317 2398 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 IL6STP1-201ENST00000346911 1020 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 RNA5SP326-201ENST00000363209 110 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 RNU6-621P-201ENST00000364752 109 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 Y_RNA.311-201ENST00000365068 96 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 RSL24D1P4-201ENST00000400938 484 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 RNU2-42P-201ENST00000410697 113 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 RNU4-72P-201ENST00000410754 173 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC096921.1-201ENST00000411661 375 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AL365203.2-201ENST00000423444 196 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AL513175.1-201ENST00000431492 780 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 UBE2D3P1-201ENST00000436669 444 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC241584.1-201ENST00000438469 1241 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 MTND5P2-201ENST00000442927 1142 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 RAB11AP1-201ENST00000442978 646 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 EEF1A1P1-201ENST00000447052 739 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC239809.1-201ENST00000450470 217 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 NDUFA5P7-201ENST00000452914 242 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC083899.1-201ENST00000454465 3819 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 RN7SL222P-201ENST00000476452 299 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC126121.1-201ENST00000482313 553 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC004453.1-201ENST00000487895 408 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 DUTP1-201ENST00000493631 470 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 RN7SKP99-201ENST00000517028 307 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 SMARCE1P4-201ENST00000523647 241 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 OR4A43P-201ENST00000532938 908 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC126177.5-201ENST00000549599 178 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 HIGD1AP17-201ENST00000554576 276 ntBASIC6.35□□□□□ -1.39
CCDC144BQ3MJ40 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms