Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ODF4Q2M2E3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
ODF4Q2M2E3 SMG1P6-201ENST00000532337 2930 ntBASIC4.27□□□□□ -1.73
ODF4Q2M2E3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ODF4Q2M2E3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ODF4Q2M2E3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ODF4Q2M2E3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC120338.1-201ENST00000625074 1541 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC010329.2-201ENST00000595195 2737 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 RNU6-1339P-201ENST00000363574 91 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 RN7SKP162-201ENST00000363605 345 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 RN7SKP160-201ENST00000363804 340 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 RNU6-603P-201ENST00000411403 107 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 TAF13P2-201ENST00000416876 286 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 USP9YP21-201ENST00000420603 432 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AL121776.1-201ENST00000429337 372 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 HMGB1P45-201ENST00000435986 653 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC009263.1-201ENST00000441193 1239 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 OR7E125P-201ENST00000443450 846 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AL137845.2-201ENST00000444292 988 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 YWHAQP9-201ENST00000445891 512 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 CYCSP34-201ENST00000458172 304 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC108751.2-201ENST00000469993 231 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 RN7SL174P-201ENST00000475578 289 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 RN7SL244P-201ENST00000493405 297 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 COX6B1P5-201ENST00000509843 249 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 PRELID3BP4-201ENST00000515476 571 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 RNA5SP43-201ENST00000516559 110 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 HMGB1P1-201ENST00000522557 636 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 OR7E128P-201ENST00000532736 1024 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AL049839.1-201ENST00000556151 657 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AL049838.1-201ENST00000563647 981 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC115085.1-201ENST00000588924 229 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 PSMA6P4-201ENST00000603247 718 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC233280.2-201ENST00000603917 1070 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 Z82195.1-201ENST00000604558 398 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC006946.3-201ENST00000609791 756 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AL022401.1-201ENST00000619498 108 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AC008115.4-201ENST00000619780 775 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AL121594.5-201ENST00000631724 573 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ODF4Q2M2E3 AL359922.3-201ENST00000624779 1670 ntBASIC4.26□□□□□ -1.73
ODF4Q2M2E3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
ODF4Q2M2E3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.25□□□□□ -1.73
ODF4Q2M2E3 AC090017.1-201ENST00000548612 1779 ntBASIC4.25□□□□□ -1.73
ODF4Q2M2E3 SCN1A-220ENST00000641603 12506 ntBASIC4.25□□□□□ -1.73
ODF4Q2M2E3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
ODF4Q2M2E3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ODF4Q2M2E3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.25□□□□□ -1.73
ODF4Q2M2E3 RNU6-353P-201ENST00000364266 108 ntBASIC4.25□□□□□ -1.73
ODF4Q2M2E3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ODF4Q2M2E3 U3.25-201ENST00000391209 220 ntBASIC4.25□□□□□ -1.73
ODF4Q2M2E3 AC005522.1-201ENST00000395416 346 ntBASIC4.25□□□□□ -1.73
ODF4Q2M2E3 RPL7P27-201ENST00000403775 720 ntBASIC4.25□□□□□ -1.73
ODF4Q2M2E3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ODF4Q2M2E3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ODF4Q2M2E3 RN7SKP199-201ENST00000410325 305 ntBASIC4.25□□□□□ -1.73
ODF4Q2M2E3 RNU6-584P-201ENST00000410350 95 ntBASIC4.25□□□□□ -1.73
ODF4Q2M2E3 MTCO2P8-201ENST00000412213 658 ntBASIC4.25□□□□□ -1.73
ODF4Q2M2E3 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.25□□□□□ -1.73
ODF4Q2M2E3 AC106883.1-201ENST00000418805 562 ntBASIC4.25□□□□□ -1.73
ODF4Q2M2E3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.25□□□□□ -1.73
ODF4Q2M2E3 SFR1P2-201ENST00000421841 730 ntBASIC4.25□□□□□ -1.73
ODF4Q2M2E3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ODF4Q2M2E3 FABP7P2-201ENST00000429946 379 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms