Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.67□□□□□ -1.66
CDH12P55289 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 AC116553.2-201ENST00000564203 463 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 BNIP3P4-201ENST00000604946 565 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AL451049.1-201ENST00000608672 497 ntBASIC4.67□□□□□ -1.66
CDH12P55289 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH12P55289 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CDH12P55289 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH12P55289 AC090527.3-201ENST00000619041 548 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH12P55289 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH12P55289 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH12P55289 AL137100.1-201ENST00000556703 1620 ntBASIC4.67□□□□□ -1.66
CDH12P55289 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH12P55289 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH12P55289 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH12P55289 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH12P55289 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH12P55289 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CDH12P55289 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH12P55289 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH12P55289 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH12P55289 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH12P55289 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH12P55289 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
CDH12P55289 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CDH12P55289 RNA5SP183-201ENST00000362452 119 ntBASIC4.66□□□□□ -1.66
CDH12P55289 RN7SKP113-201ENST00000363891 295 ntBASIC4.66□□□□□ -1.66
CDH12P55289 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH12P55289 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDH12P55289 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDH12P55289 SNORA40.2-201ENST00000390847 128 ntBASIC4.66□□□□□ -1.66
CDH12P55289 ERHP2-201ENST00000402323 299 ntBASIC4.66□□□□□ -1.66
CDH12P55289 AL079342.2-201ENST00000403367 482 ntBASIC4.66□□□□□ -1.66
CDH12P55289 FCF1P5-201ENST00000406490 482 ntBASIC4.66□□□□□ -1.66
CDH12P55289 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CDH12P55289 RNU2-22P-201ENST00000411266 212 ntBASIC4.66□□□□□ -1.66
CDH12P55289 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH12P55289 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH12P55289 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH12P55289 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH12P55289 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH12P55289 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH12P55289 SPRYD7P1-201ENST00000443861 570 ntBASIC4.66□□□□□ -1.66
CDH12P55289 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH12P55289 AL031584.1-201ENST00000447169 754 ntBASIC4.66□□□□□ -1.66
CDH12P55289 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH12P55289 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH12P55289 AC091959.2-201ENST00000477363 321 ntBASIC4.66□□□□□ -1.66
CDH12P55289 AC090686.1-201ENST00000481577 749 ntBASIC4.66□□□□□ -1.66
CDH12P55289 AL136038.1-201ENST00000497246 351 ntBASIC4.66□□□□□ -1.66
CDH12P55289 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH12P55289 AC111193.1-201ENST00000504097 155 ntBASIC4.66□□□□□ -1.66
CDH12P55289 PGAM1P13-201ENST00000507497 754 ntBASIC4.66□□□□□ -1.66
CDH12P55289 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH12P55289 AC138938.1-201ENST00000515431 782 ntBASIC4.66□□□□□ -1.66
CDH12P55289 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH12P55289 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH12P55289 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH12P55289 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH12P55289 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH12P55289 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH12P55289 NPM1P47-201ENST00000560843 856 ntBASIC4.66□□□□□ -1.66
CDH12P55289 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH12P55289 AC022884.3-201ENST00000579571 248 ntBASIC4.66□□□□□ -1.66
CDH12P55289 AP001269.3-201ENST00000588718 329 ntBASIC4.66□□□□□ -1.66
CDH12P55289 FKBP1AP1-201ENST00000594588 318 ntBASIC4.66□□□□□ -1.66
CDH12P55289 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH12P55289 RPSAP73-201ENST00000614820 330 ntBASIC4.66□□□□□ -1.66
CDH12P55289 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.66□□□□□ -1.66
CDH12P55289 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH12P55289 AC022106.2-201ENST00000620114 757 ntBASIC4.66□□□□□ -1.66
CDH12P55289 MIR6837-201ENST00000620884 64 ntBASIC4.66□□□□□ -1.66
CDH12P55289 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH12P55289 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH12P55289 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH12P55289 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CDH12P55289 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH12P55289 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH12P55289 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH12P55289 NSRP1P1-201ENST00000444067 1693 ntBASIC4.66□□□□□ -1.66
CDH12P55289 CASC19-284ENST00000642142 1868 ntBASIC4.66□□□□□ -1.66
CDH12P55289 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDH12P55289 VPS35P1-201ENST00000563400 1518 ntBASIC4.66□□□□□ -1.66
CDH12P55289 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH12P55289 RLIMP2-201ENST00000427891 1563 ntBASIC4.65□□□□□ -1.66
CDH12P55289 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.65□□□□□ -1.66
CDH12P55289 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CDH12P55289 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CDH12P55289 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CDH12P55289 AC011493.1-201ENST00000596753 1632 ntBASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms