Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RPL17P50-201ENST00000396131 546 ntBASIC5.01□□□□□ -1.61
NUP98P52948 AC018644.1-201ENST00000429934 551 ntBASIC5.01□□□□□ -1.61
NUP98P52948 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.01□□□□□ -1.61
NUP98P52948 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.01□□□□□ -1.61
NUP98P52948 NDUFA5P2-201ENST00000519723 344 ntBASIC5.01□□□□□ -1.61
NUP98P52948 AC022968.1-201ENST00000567372 442 ntBASIC5.01□□□□□ -1.61
NUP98P52948 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.01□□□□□ -1.61
NUP98P52948 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NUP98P52948 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.01□□□□□ -1.61
NUP98P52948 HSPD1P11-201ENST00000508643 1702 ntBASIC5.01□□□□□ -1.61
NUP98P52948 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.01□□□□□ -1.61
NUP98P52948 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NUP98P52948 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
NUP98P52948 MARK2P15-201ENST00000432204 2186 ntBASIC5□□□□□ -1.61
NUP98P52948 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5□□□□□ -1.61
NUP98P52948 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5□□□□□ -1.61
NUP98P52948 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5□□□□□ -1.61
NUP98P52948 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5□□□□□ -1.61
NUP98P52948 AC006499.5-201ENST00000505037 514 ntBASIC5□□□□□ -1.61
NUP98P52948 AC087369.1-201ENST00000520775 996 ntBASIC5□□□□□ -1.61
NUP98P52948 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5□□□□□ -1.61
NUP98P52948 SNX6P1-201ENST00000601728 1224 ntBASIC5□□□□□ -1.61
NUP98P52948 AF001550.2-201ENST00000636643 217 ntBASIC5□□□□□ -1.61
NUP98P52948 AC006971.1-201ENST00000407916 4486 ntBASIC5□□□□□ -1.61
NUP98P52948 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5□□□□□ -1.61
NUP98P52948 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP98P52948 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP98P52948 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NUP98P52948 GVINP1-202ENST00000531871 7271 ntBASIC5□□□□□ -1.61
NUP98P52948 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5□□□□□ -1.61
NUP98P52948 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
NUP98P52948 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NUP98P52948 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5□□□□□ -1.61
NUP98P52948 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
NUP98P52948 NPM1P37-201ENST00000403105 874 ntBASIC5□□□□□ -1.61
NUP98P52948 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5□□□□□ -1.61
NUP98P52948 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5□□□□□ -1.61
NUP98P52948 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5□□□□□ -1.61
NUP98P52948 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5□□□□□ -1.61
NUP98P52948 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
NUP98P52948 Z95327.2-201ENST00000414579 1873 ntBASIC4.99□□□□□ -1.61
NUP98P52948 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.99□□□□□ -1.61
NUP98P52948 AP001642.1-201ENST00000624727 2117 ntBASIC4.99□□□□□ -1.61
NUP98P52948 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NUP98P52948 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.99□□□□□ -1.61
NUP98P52948 RNU1-15P-201ENST00000353977 144 ntBASIC4.99□□□□□ -1.61
NUP98P52948 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NUP98P52948 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP98P52948 AC006042.3-201ENST00000454684 1469 ntBASIC4.99□□□□□ -1.61
NUP98P52948 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.99□□□□□ -1.61
NUP98P52948 PAICSP4-201ENST00000517543 1253 ntBASIC4.99□□□□□ -1.61
NUP98P52948 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP98P52948 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.99□□□□□ -1.61
NUP98P52948 NPM1P47-201ENST00000560843 856 ntBASIC4.99□□□□□ -1.61
NUP98P52948 RPL23AP87-202ENST00000573039 466 ntBASIC4.99□□□□□ -1.61
NUP98P52948 AL451044.1-201ENST00000604867 238 ntBASIC4.99□□□□□ -1.61
NUP98P52948 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NUP98P52948 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP98P52948 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP98P52948 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP98P52948 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP98P52948 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP98P52948 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP98P52948 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NUP98P52948 RNA5SP372-201ENST00000390836 115 ntBASIC4.98□□□□□ -1.61
NUP98P52948 RPL21P17-201ENST00000397467 475 ntBASIC4.98□□□□□ -1.61
NUP98P52948 PEX12P1-201ENST00000400284 1048 ntBASIC4.98□□□□□ -1.61
NUP98P52948 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP98P52948 TCEA1P4-201ENST00000415066 844 ntBASIC4.98□□□□□ -1.61
NUP98P52948 AC068533.1-201ENST00000418542 415 ntBASIC4.98□□□□□ -1.61
NUP98P52948 RPL23AP89-201ENST00000439324 255 ntBASIC4.98□□□□□ -1.61
NUP98P52948 AC092691.2-201ENST00000461787 803 ntBASIC4.98□□□□□ -1.61
NUP98P52948 AC026726.1-201ENST00000512859 601 ntBASIC4.98□□□□□ -1.61
NUP98P52948 RNU7-143P-201ENST00000516781 65 ntBASIC4.98□□□□□ -1.61
NUP98P52948 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP98P52948 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.98□□□□□ -1.61
NUP98P52948 SNORA51-201ENST00000606420 132 ntBASIC4.98□□□□□ -1.61
NUP98P52948 SNORD91B-202ENST00000608459 222 ntBASIC4.98□□□□□ -1.61
NUP98P52948 AC069200.1-201ENST00000609511 323 ntBASIC4.98□□□□□ -1.61
NUP98P52948 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.98□□□□□ -1.61
NUP98P52948 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
NUP98P52948 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP98P52948 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
NUP98P52948 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NUP98P52948 AC126323.6-202ENST00000568092 3511 ntBASIC4.98□□□□□ -1.61
NUP98P52948 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NUP98P52948 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP98P52948 MIR449B-201ENST00000384995 97 ntBASIC4.97□□□□□ -1.61
NUP98P52948 AC007066.1-201ENST00000392902 381 ntBASIC4.97□□□□□ -1.61
NUP98P52948 SNORA57.3-201ENST00000411095 141 ntBASIC4.97□□□□□ -1.61
NUP98P52948 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP98P52948 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.97□□□□□ -1.61
NUP98P52948 AC008155.2-201ENST00000464337 397 ntBASIC4.97□□□□□ -1.61
NUP98P52948 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP98P52948 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUP98P52948 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP98P52948 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.97□□□□□ -1.61
NUP98P52948 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.97□□□□□ -1.61
NUP98P52948 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.97□□□□□ -1.61
NUP98P52948 AC084757.4-201ENST00000616350 526 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms