Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COL4A5P29400 AC097461.1-201ENST00000568928 2821 ntBASIC4.82□□□□□ -1.64
COL4A5P29400 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.82□□□□□ -1.64
COL4A5P29400 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A5P29400 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A5P29400 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A5P29400 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A5P29400 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
COL4A5P29400 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A5P29400 RPS21P8-201ENST00000413365 247 ntBASIC4.82□□□□□ -1.64
COL4A5P29400 RPL36AP10-201ENST00000421785 322 ntBASIC4.82□□□□□ -1.64
COL4A5P29400 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.82□□□□□ -1.64
COL4A5P29400 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.82□□□□□ -1.64
COL4A5P29400 AL133162.1-201ENST00000463228 453 ntBASIC4.82□□□□□ -1.64
COL4A5P29400 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.82□□□□□ -1.64
COL4A5P29400 AC119751.5-201ENST00000514077 770 ntBASIC4.82□□□□□ -1.64
COL4A5P29400 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.82□□□□□ -1.64
COL4A5P29400 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.82□□□□□ -1.64
COL4A5P29400 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.82□□□□□ -1.64
COL4A5P29400 DUX4L52-201ENST00000549363 777 ntBASIC4.82□□□□□ -1.64
COL4A5P29400 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.82□□□□□ -1.64
COL4A5P29400 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.82□□□□□ -1.64
COL4A5P29400 U3.45-201ENST00000607547 219 ntBASIC4.82□□□□□ -1.64
COL4A5P29400 AL391497.1-201ENST00000608671 547 ntBASIC4.82□□□□□ -1.64
COL4A5P29400 AF001550.2-201ENST00000636643 217 ntBASIC4.82□□□□□ -1.64
COL4A5P29400 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A5P29400 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A5P29400 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A5P29400 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A5P29400 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL4A5P29400 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A5P29400 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A5P29400 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
COL4A5P29400 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A5P29400 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A5P29400 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A5P29400 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL4A5P29400 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.81□□□□□ -1.64
COL4A5P29400 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A5P29400 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
COL4A5P29400 OR52E6-202ENST00000379946 954 ntBASIC4.81□□□□□ -1.64
COL4A5P29400 MIR490-201ENST00000384865 128 ntBASIC4.81□□□□□ -1.64
COL4A5P29400 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL4A5P29400 AL161631.1-201ENST00000417933 486 ntBASIC4.81□□□□□ -1.64
COL4A5P29400 Z74696.2-201ENST00000436514 498 ntBASIC4.81□□□□□ -1.64
COL4A5P29400 RPS4XP10-201ENST00000465034 731 ntBASIC4.81□□□□□ -1.64
COL4A5P29400 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.81□□□□□ -1.64
COL4A5P29400 HSPD1P15-201ENST00000505573 1122 ntBASIC4.81□□□□□ -1.64
COL4A5P29400 RNU7-143P-201ENST00000516781 65 ntBASIC4.81□□□□□ -1.64
COL4A5P29400 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.81□□□□□ -1.64
COL4A5P29400 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A5P29400 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A5P29400 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC4.81□□□□□ -1.64
COL4A5P29400 AC022146.1-201ENST00000595307 847 ntBASIC4.81□□□□□ -1.64
COL4A5P29400 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.81□□□□□ -1.64
COL4A5P29400 AC074029.4-201ENST00000624796 1859 ntBASIC4.81□□□□□ -1.64
COL4A5P29400 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A5P29400 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL4A5P29400 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A5P29400 LINC00561-201ENST00000565815 2738 ntBASIC4.81□□□□□ -1.64
COL4A5P29400 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
COL4A5P29400 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A5P29400 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A5P29400 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.81□□□□□ -1.64
COL4A5P29400 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A5P29400 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL4A5P29400 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A5P29400 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL4A5P29400 Z92545.1-201ENST00000411782 234 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.8□□□□□ -1.64
COL4A5P29400 AL590609.2-201ENST00000421430 368 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL4A5P29400 CYCSP53-201ENST00000455540 265 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 AC090589.1-201ENST00000473109 362 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.8□□□□□ -1.64
COL4A5P29400 RPL23AP87-202ENST00000573039 466 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC4.8□□□□□ -1.64
COL4A5P29400 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
COL4A5P29400 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.8□□□□□ -1.64
COL4A5P29400 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL4A5P29400 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.8□□□□□ -1.64
COL4A5P29400 AP000473.2-201ENST00000602659 1537 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL4A5P29400 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL4A5P29400 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL4A5P29400 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL4A5P29400 RNA5SP51-201ENST00000364750 119 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 PEX12P1-201ENST00000400284 1048 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 AC092647.1-201ENST00000420654 287 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 TMX2P1-201ENST00000436507 708 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.8□□□□□ -1.64
COL4A5P29400 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.8□□□□□ -1.64
COL4A5P29400 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.8□□□□□ -1.64
COL4A5P29400 AC093815.1-201ENST00000508637 280 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.8□□□□□ -1.64
COL4A5P29400 OR8I1P-201ENST00000529291 931 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 AC025627.2-201ENST00000576220 160 ntBASIC4.8□□□□□ -1.64
COL4A5P29400 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.8□□□□□ -1.64
COL4A5P29400 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL4A5P29400 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms