Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.75□□□□□ -1.81
FREM3P0C091 KCTD10P1-201ENST00000434203 625 ntBASIC3.75□□□□□ -1.81
FREM3P0C091 AP000942.1-201ENST00000463969 747 ntBASIC3.75□□□□□ -1.81
FREM3P0C091 STMN1P2-201ENST00000508435 439 ntBASIC3.75□□□□□ -1.81
FREM3P0C091 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.75□□□□□ -1.81
FREM3P0C091 HMGB1P19-201ENST00000517578 577 ntBASIC3.75□□□□□ -1.81
FREM3P0C091 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.75□□□□□ -1.81
FREM3P0C091 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.75□□□□□ -1.81
FREM3P0C091 AC090246.1-201ENST00000616499 426 ntBASIC3.75□□□□□ -1.81
FREM3P0C091 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
FREM3P0C091 Z95327.2-201ENST00000414579 1873 ntBASIC3.75□□□□□ -1.81
FREM3P0C091 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
FREM3P0C091 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.75□□□□□ -1.81
FREM3P0C091 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.75□□□□□ -1.81
FREM3P0C091 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
FREM3P0C091 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.75□□□□□ -1.81
FREM3P0C091 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
FREM3P0C091 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.74□□□□□ -1.81
FREM3P0C091 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.74□□□□□ -1.81
FREM3P0C091 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
FREM3P0C091 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FREM3P0C091 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
FREM3P0C091 EIF1P3-201ENST00000423841 334 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 MRPL50P1-201ENST00000431951 384 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.74□□□□□ -1.81
FREM3P0C091 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.74□□□□□ -1.81
FREM3P0C091 PARP4P3-201ENST00000510265 317 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 RNA5SP179-201ENST00000517284 121 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.74□□□□□ -1.81
FREM3P0C091 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
FREM3P0C091 AC084824.1-201ENST00000550917 1005 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.74□□□□□ -1.81
FREM3P0C091 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.74□□□□□ -1.81
FREM3P0C091 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.74□□□□□ -1.81
FREM3P0C091 AC006130.2-201ENST00000586202 326 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 AC012603.1-201ENST00000606424 528 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FREM3P0C091 LINC01109-201ENST00000603837 3081 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
FREM3P0C091 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
FREM3P0C091 AC005332.5-201ENST00000591222 2919 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.74□□□□□ -1.81
FREM3P0C091 AC009951.1-201ENST00000623674 2614 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.74□□□□□ -1.81
FREM3P0C091 RNA5SP175-201ENST00000364275 119 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 RPS24P12-201ENST00000402084 394 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 HDGFP1-201ENST00000405943 252 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 SETP15-201ENST00000412724 337 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 GSTM3P2-201ENST00000412746 530 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 CYCSP10-201ENST00000417973 294 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 RPL21P89-201ENST00000444021 467 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 PPIAP15-201ENST00000479662 484 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 HPRT1P2-201ENST00000505250 544 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.74□□□□□ -1.81
FREM3P0C091 SS18L2P2-201ENST00000583960 235 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.74□□□□□ -1.81
FREM3P0C091 RNU4-89P-201ENST00000607443 133 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.74□□□□□ -1.81
FREM3P0C091 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
FREM3P0C091 AC010608.2-201ENST00000624830 470 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.74□□□□□ -1.81
FREM3P0C091 AC138627.1-204ENST00000641894 765 ntBASIC3.74□□□□□ -1.81
FREM3P0C091 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
FREM3P0C091 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
FREM3P0C091 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FREM3P0C091 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
FREM3P0C091 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FREM3P0C091 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.74□□□□□ -1.81
FREM3P0C091 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
FREM3P0C091 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
FREM3P0C091 AL592182.3-201ENST00000642132 3304 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
FREM3P0C091 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
FREM3P0C091 MAPRE1P3-201ENST00000435438 796 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 AC012123.2-201ENST00000485809 248 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 TVP23BP1-201ENST00000557500 617 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.73□□□□□ -1.81
FREM3P0C091 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.73□□□□□ -1.81
FREM3P0C091 MIR432-201ENST00000606207 94 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.73□□□□□ -1.81
FREM3P0C091 AL596275.2-204ENST00000641628 552 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 AL596275.2-206ENST00000641957 626 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 AC104118.1-201ENST00000607625 1589 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 LINC01355-201ENST00000566551 5444 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
FREM3P0C091 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 SAMMSON-213ENST00000641336 1521 ntBASIC3.73□□□□□ -1.81
FREM3P0C091 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
FREM3P0C091 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.73□□□□□ -1.81
FREM3P0C091 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FREM3P0C091 AL158073.1-201ENST00000426848 1104 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms