Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AP002906.1-201ENST00000603405 233 ntBASIC4.86□□□□□ -1.63
MMP2P08253 AC010200.2-201ENST00000605098 235 ntBASIC4.86□□□□□ -1.63
MMP2P08253 AC013244.3-201ENST00000605614 388 ntBASIC4.86□□□□□ -1.63
MMP2P08253 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP2P08253 AC096586.1-201ENST00000610267 561 ntBASIC4.86□□□□□ -1.63
MMP2P08253 AC116447.1-201ENST00000613153 453 ntBASIC4.86□□□□□ -1.63
MMP2P08253 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.86□□□□□ -1.63
MMP2P08253 AC012414.7-202ENST00000622705 1090 ntBASIC4.86□□□□□ -1.63
MMP2P08253 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.86□□□□□ -1.63
MMP2P08253 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.86□□□□□ -1.63
MMP2P08253 CASC19-222ENST00000641321 1173 ntBASIC4.86□□□□□ -1.63
MMP2P08253 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
MMP2P08253 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.86□□□□□ -1.63
MMP2P08253 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MMP2P08253 TCP11X1-202ENST00000622971 1372 ntBASIC4.86□□□□□ -1.63
MMP2P08253 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
MMP2P08253 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
MMP2P08253 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MMP2P08253 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MMP2P08253 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
MMP2P08253 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
MMP2P08253 DHX9P1-201ENST00000436565 3076 ntBASIC4.86□□□□□ -1.63
MMP2P08253 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.85□□□□□ -1.63
MMP2P08253 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP2P08253 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.85□□□□□ -1.63
MMP2P08253 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
MMP2P08253 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP2P08253 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP2P08253 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.85□□□□□ -1.63
MMP2P08253 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP2P08253 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
MMP2P08253 RNU6-932P-201ENST00000391108 106 ntBASIC4.85□□□□□ -1.63
MMP2P08253 RN7SKP125-201ENST00000410481 302 ntBASIC4.85□□□□□ -1.63
MMP2P08253 RNA5SP113-201ENST00000410486 84 ntBASIC4.85□□□□□ -1.63
MMP2P08253 LINC01881-201ENST00000416103 412 ntBASIC4.85□□□□□ -1.63
MMP2P08253 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.85□□□□□ -1.63
MMP2P08253 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.85□□□□□ -1.63
MMP2P08253 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.85□□□□□ -1.63
MMP2P08253 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP2P08253 RPL7L1P1-201ENST00000448259 785 ntBASIC4.85□□□□□ -1.63
MMP2P08253 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.85□□□□□ -1.63
MMP2P08253 RPS3AP41-201ENST00000462701 778 ntBASIC4.85□□□□□ -1.63
MMP2P08253 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP2P08253 RPL5P22-201ENST00000480199 884 ntBASIC4.85□□□□□ -1.63
MMP2P08253 IGLV2-34-201ENST00000490007 283 ntBASIC4.85□□□□□ -1.63
MMP2P08253 SCARNA22-201ENST00000503991 125 ntBASIC4.85□□□□□ -1.63
MMP2P08253 AC026414.1-201ENST00000504046 698 ntBASIC4.85□□□□□ -1.63
MMP2P08253 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.85□□□□□ -1.63
MMP2P08253 RNA5SP303-201ENST00000516192 130 ntBASIC4.85□□□□□ -1.63
MMP2P08253 AP001922.4-201ENST00000526967 290 ntBASIC4.85□□□□□ -1.63
MMP2P08253 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP2P08253 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP2P08253 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.85□□□□□ -1.63
MMP2P08253 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.85□□□□□ -1.63
MMP2P08253 MIR4436B2-201ENST00000581415 91 ntBASIC4.85□□□□□ -1.63
MMP2P08253 MIR4436B1-201ENST00000583272 91 ntBASIC4.85□□□□□ -1.63
MMP2P08253 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MMP2P08253 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP2P08253 VN1R87P-201ENST00000596706 487 ntBASIC4.85□□□□□ -1.63
MMP2P08253 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
MMP2P08253 AL031320.1-201ENST00000604177 357 ntBASIC4.85□□□□□ -1.63
MMP2P08253 AC073387.2-201ENST00000604797 784 ntBASIC4.85□□□□□ -1.63
MMP2P08253 AL157392.4-201ENST00000609756 345 ntBASIC4.85□□□□□ -1.63
MMP2P08253 FRG1HP-204ENST00000617940 757 ntBASIC4.85□□□□□ -1.63
MMP2P08253 AP003497.2-201ENST00000624220 967 ntBASIC4.85□□□□□ -1.63
MMP2P08253 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
MMP2P08253 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP2P08253 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP2P08253 GTF2H2B-203ENST00000508065 1432 ntBASIC4.85□□□□□ -1.63
MMP2P08253 CASC19-206ENST00000641028 1430 ntBASIC4.85□□□□□ -1.63
MMP2P08253 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MMP2P08253 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP2P08253 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.85□□□□□ -1.63
MMP2P08253 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
MMP2P08253 AC090971.4-201ENST00000560291 1800 ntBASIC4.85□□□□□ -1.63
MMP2P08253 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP2P08253 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
MMP2P08253 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.85□□□□□ -1.63
MMP2P08253 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MMP2P08253 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MMP2P08253 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP2P08253 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
MMP2P08253 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.84□□□□□ -1.63
MMP2P08253 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MMP2P08253 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.84□□□□□ -1.63
MMP2P08253 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.84□□□□□ -1.63
MMP2P08253 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MMP2P08253 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MMP2P08253 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.84□□□□□ -1.63
MMP2P08253 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.84□□□□□ -1.63
MMP2P08253 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.84□□□□□ -1.63
MMP2P08253 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MMP2P08253 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MMP2P08253 ZNF29P-201ENST00000225587 168 ntBASIC4.84□□□□□ -1.63
MMP2P08253 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
MMP2P08253 BMS1P3-201ENST00000372011 932 ntBASIC4.84□□□□□ -1.63
MMP2P08253 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
MMP2P08253 SNORD65C-201ENST00000390962 71 ntBASIC4.84□□□□□ -1.63
MMP2P08253 RSU1P3-201ENST00000412878 835 ntBASIC4.84□□□□□ -1.63
MMP2P08253 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms