Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC9□□□□□ -0.97
PHF8Q9UPP1 AC012618.3-205ENST00000637896 1496 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
PHF8Q9UPP1 PHF2P2-202ENST00000444553 2865 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 AC007485.2-201ENST00000623493 1667 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC9□□□□□ -0.97
PHF8Q9UPP1 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
PHF8Q9UPP1 AC090337.1-201ENST00000579651 2074 ntBASIC9□□□□□ -0.97
PHF8Q9UPP1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 SNORA51.9-201ENST00000384295 124 ntBASIC8.99□□□□□ -0.97
PHF8Q9UPP1 Y_RNA.556-201ENST00000384677 113 ntBASIC8.99□□□□□ -0.97
PHF8Q9UPP1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 CHEK2P5-201ENST00000423877 246 ntBASIC8.99□□□□□ -0.97
PHF8Q9UPP1 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 RNU6-388P-201ENST00000517012 105 ntBASIC8.99□□□□□ -0.97
PHF8Q9UPP1 RNU6-389P-201ENST00000517048 105 ntBASIC8.99□□□□□ -0.97
PHF8Q9UPP1 AC009812.2-201ENST00000517657 457 ntBASIC8.99□□□□□ -0.97
PHF8Q9UPP1 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 IGHV3-63-201ENST00000518422 341 ntBASIC8.99□□□□□ -0.97
PHF8Q9UPP1 OR5M2P-201ENST00000529003 936 ntBASIC8.99□□□□□ -0.97
PHF8Q9UPP1 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 AC079905.1-201ENST00000549280 475 ntBASIC8.99□□□□□ -0.97
PHF8Q9UPP1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 AC092266.1-201ENST00000610958 165 ntBASIC8.99□□□□□ -0.97
PHF8Q9UPP1 MIR6085-201ENST00000618314 110 ntBASIC8.99□□□□□ -0.97
PHF8Q9UPP1 AP001264.1-201ENST00000620602 703 ntBASIC8.99□□□□□ -0.97
PHF8Q9UPP1 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PHF8Q9UPP1 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 MTND5P10-201ENST00000603719 1809 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 NPL-212ENST00000614468 2376 ntTSL 5 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 SNRPEP3-201ENST00000338402 276 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AL031985.1-201ENST00000392713 418 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 BTBD10P2-201ENST00000404779 676 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 RN7SKP229-201ENST00000410465 302 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 RN7SKP271-201ENST00000410528 320 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 CYP4F32P-201ENST00000426492 504 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 UBE2V1P5-201ENST00000440070 405 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AL645936.1-201ENST00000441979 518 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 PPIAP27-201ENST00000453800 265 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 RPL7P22-201ENST00000466005 733 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 RNU6-1334P-201ENST00000516032 105 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AC022616.6-201ENST00000520479 119 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AP002373.2-201ENST00000541631 1060 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 MRPS21P8-201ENST00000569196 235 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AC106785.4-201ENST00000569492 412 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 RN7SL475P-201ENST00000583379 298 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AC013244.1-201ENST00000604279 193 ntBASIC8.98□□□□□ -0.97
PHF8Q9UPP1 AC073046.2-201ENST00000604756 527 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms