Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.02□□□□□ -1.61
LRFN1Q9P244 HMGB1P44-201ENST00000508597 572 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 AC108043.1-201ENST00000512696 574 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 AC093755.1-201ENST00000512950 1023 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.02□□□□□ -1.61
LRFN1Q9P244 HMGB1P40-201ENST00000525121 540 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 LRRC34P1-201ENST00000542742 915 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.02□□□□□ -1.61
LRFN1Q9P244 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRFN1Q9P244 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.02□□□□□ -1.61
LRFN1Q9P244 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.02□□□□□ -1.61
LRFN1Q9P244 AC009097.3-201ENST00000563557 1018 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 AL390726.5-202ENST00000564800 256 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRFN1Q9P244 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.02□□□□□ -1.61
LRFN1Q9P244 AC025588.2-201ENST00000604851 466 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 AL022394.1-201ENST00000606979 292 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 AL354760.1-201ENST00000608357 643 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRFN1Q9P244 RPSAP73-201ENST00000614820 330 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 MIR6864-201ENST00000617935 70 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 RNU6-156P-201ENST00000621869 107 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 AC135068.5-201ENST00000624197 983 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRFN1Q9P244 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LRFN1Q9P244 AL603750.1-201ENST00000624216 1717 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRFN1Q9P244 AC107081.3-201ENST00000612715 2034 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
LRFN1Q9P244 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRFN1Q9P244 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 ADAM24P-201ENST00000398655 2101 ntBASIC5.02□□□□□ -1.61
LRFN1Q9P244 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRFN1Q9P244 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRFN1Q9P244 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC004817.4-201ENST00000602396 3625 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 RNA5SP453-201ENST00000362503 119 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 SNORA67-201ENST00000384423 137 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 RNA5SP339-201ENST00000390987 122 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 AL161909.1-201ENST00000397390 712 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 EI24P3-201ENST00000399046 1062 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 AL133388.1-201ENST00000404509 287 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 AL133482.1-201ENST00000415988 498 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 SAGE2P-201ENST00000420011 2126 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 SRSF1P1-201ENST00000424058 520 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AL513175.1-201ENST00000431492 780 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC010881.1-201ENST00000433830 235 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 GSTM5P1-201ENST00000434751 660 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 IGBP1P3-201ENST00000447449 1000 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AURKAPS1-201ENST00000451805 1212 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC072052.1-201ENST00000496556 306 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 BOLA3P3-201ENST00000505182 232 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC025674.1-201ENST00000507074 324 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 MRPS36P3-201ENST00000519284 130 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRFN1Q9P244 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC074029.1-201ENST00000552531 1044 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 GAS5-AS1-201ENST00000602767 694 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 MIR6748-201ENST00000610433 71 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC092106.3-201ENST00000611308 722 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 AL359535.1-201ENST00000612100 1087 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC107075.1-201ENST00000613695 314 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 AL512506.2-201ENST00000624472 458 ntBASIC5.01□□□□□ -1.61
LRFN1Q9P244 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.01□□□□□ -1.61
LRFN1Q9P244 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms