Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RPL23AP59-201ENST00000399415 461 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 ARL4AP5-201ENST00000404372 599 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 GTF2IP2-201ENST00000424290 697 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 MTCYBP29-201ENST00000436327 1006 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 AC109327.1-201ENST00000471666 403 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 AC104763.1-201ENST00000475274 360 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 ACTR6P1-201ENST00000514311 1104 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 RNU6-362P-201ENST00000516736 90 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 DYNLL1P4-201ENST00000549314 266 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 AC018552.3-201ENST00000567416 561 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 MIR6716-201ENST00000613413 80 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 AC068724.3-201ENST00000625906 87 ntBASIC4.78□□□□□ -1.64
HPS4Q9NQG7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS4Q9NQG7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 RPL21P108-201ENST00000413857 481 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 TMBIM7P-201ENST00000418074 855 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 VN1R37P-201ENST00000419096 748 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 TRIM60P13-201ENST00000432350 1283 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 FTH1P16-201ENST00000435241 552 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AC114878.1-201ENST00000441166 358 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 RPL23AP24-201ENST00000458203 385 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 RPL21P126-201ENST00000470049 478 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AC020890.1-201ENST00000491837 504 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 ARL4AP1-201ENST00000503220 705 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AC034244.2-201ENST00000514668 858 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 IGHV3-63-201ENST00000518422 341 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 HNRNPCP4-201ENST00000571636 900 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AC069366.1-201ENST00000583159 838 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AC103792.1-201ENST00000603591 919 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AC034236.3-201ENST00000605999 461 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AL035461.2-201ENST00000619201 524 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 LINC00216-201ENST00000623548 1126 ntBASIC4.77□□□□□ -1.65
HPS4Q9NQG7 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HPS4Q9NQG7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AL133268.1-201ENST00000405676 1401 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 RPL6P29-201ENST00000414863 865 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AL590806.1-201ENST00000415818 853 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AL356387.2-201ENST00000422272 243 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 SCARNA10-201ENST00000459255 330 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC090142.1-201ENST00000465776 462 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 FABP5P6-201ENST00000510588 409 ntBASIC4.76□□□□□ -1.65
HPS4Q9NQG7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.76□□□□□ -1.65
HPS4Q9NQG7 RNU6-760P-201ENST00000516078 97 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms