Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
RTN4Q9NQC3 MIR4450-201ENST00000583589 65 ntBASIC8.84□□□□□ -0.99
RTN4Q9NQC3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC8.84□□□□□ -0.99
RTN4Q9NQC3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC8.84□□□□□ -0.99
RTN4Q9NQC3 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC8.84□□□□□ -0.99
RTN4Q9NQC3 PART1_1.1-201ENST00000611761 217 ntBASIC8.84□□□□□ -0.99
RTN4Q9NQC3 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC8.84□□□□□ -0.99
RTN4Q9NQC3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
RTN4Q9NQC3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RTN4Q9NQC3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
RTN4Q9NQC3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RTN4Q9NQC3 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RTN4Q9NQC3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
RTN4Q9NQC3 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC8.84□□□□□ -0.99
RTN4Q9NQC3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
RTN4Q9NQC3 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
RTN4Q9NQC3 AP004289.2-201ENST00000444413 1457 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
RTN4Q9NQC3 RPL4P3-201ENST00000428881 1311 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC8.83□□□□□ -1
RTN4Q9NQC3 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.83□□□□□ -1
RTN4Q9NQC3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC8.83□□□□□ -1
RTN4Q9NQC3 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.83□□□□□ -1
RTN4Q9NQC3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.83□□□□□ -1
RTN4Q9NQC3 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC8.83□□□□□ -1
RTN4Q9NQC3 RPL32P23-201ENST00000397237 405 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 RNU4-46P-201ENST00000410818 138 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC8.83□□□□□ -1
RTN4Q9NQC3 HSPE1P1-201ENST00000421494 318 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 HSPB1P1-201ENST00000423240 256 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 RAC1P6-201ENST00000423911 575 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 AC009299.1-201ENST00000429684 717 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC8.83□□□□□ -1
RTN4Q9NQC3 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC8.83□□□□□ -1
RTN4Q9NQC3 PMS2P9-201ENST00000441237 515 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 IFNWP4-201ENST00000453148 294 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 RBMY2EP-202ENST00000456360 940 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 PPP1R2P5-201ENST00000457256 603 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 RN7SL337P-201ENST00000462468 301 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 RN7SL218P-201ENST00000464637 299 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 MTCO1P29-201ENST00000496868 288 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 AC073648.3-201ENST00000504939 925 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.83□□□□□ -1
RTN4Q9NQC3 MRPS16P1-201ENST00000523462 412 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC8.83□□□□□ -1
RTN4Q9NQC3 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC8.83□□□□□ -1
RTN4Q9NQC3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC8.83□□□□□ -1
RTN4Q9NQC3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
RTN4Q9NQC3 LINC02301-202ENST00000555150 428 ntTSL 3 BASIC8.83□□□□□ -1
RTN4Q9NQC3 AC015871.1-201ENST00000557880 1081 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 HP-207ENST00000562526 685 ntTSL 3 BASIC8.83□□□□□ -1
RTN4Q9NQC3 MIR4293-201ENST00000584305 78 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC8.83□□□□□ -1
RTN4Q9NQC3 AL161729.3-201ENST00000603533 673 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 FAM30B-201ENST00000611556 397 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 uc_338.34-201ENST00000617467 174 ntBASIC8.83□□□□□ -1
RTN4Q9NQC3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
RTN4Q9NQC3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RTN4Q9NQC3 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RTN4Q9NQC3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC8.83□□□□□ -1
RTN4Q9NQC3 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.83□□□□□ -1
RTN4Q9NQC3 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.83□□□□□ -1
RTN4Q9NQC3 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.83□□□□□ -1
RTN4Q9NQC3 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RTN4Q9NQC3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC8.83□□□□□ -1
RTN4Q9NQC3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC8.82□□□□□ -1
RTN4Q9NQC3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RTN4Q9NQC3 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
RTN4Q9NQC3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.82□□□□□ -1
RTN4Q9NQC3 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RTN4Q9NQC3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC8.82□□□□□ -1
RTN4Q9NQC3 U3.14-201ENST00000365363 227 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 RNU6-356P-201ENST00000384140 107 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 MT-TS1-201ENST00000387416 69 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC8.82□□□□□ -1
RTN4Q9NQC3 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
RTN4Q9NQC3 AC013442.1-201ENST00000397347 228 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 RPS4XP9-201ENST00000405151 780 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 RNA5SP345-201ENST00000410646 108 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 Y_RNA.615-201ENST00000410769 117 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 UBE2FP1-201ENST00000416536 447 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 AF228730.4-201ENST00000421457 183 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 AL031733.1-201ENST00000422817 455 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 AC002553.1-201ENST00000442828 802 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 RPL21P133-201ENST00000443666 476 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 DEFA11P-201ENST00000446470 261 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 AC233279.1-201ENST00000455300 423 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 AL590639.1-201ENST00000456484 337 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 PPP1R11P1-201ENST00000486095 376 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 CREM-238ENST00000488741 651 ntTSL 2 BASIC8.82□□□□□ -1
RTN4Q9NQC3 RPL23AP55-201ENST00000498163 452 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC8.82□□□□□ -1
RTN4Q9NQC3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC8.82□□□□□ -1
RTN4Q9NQC3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
RTN4Q9NQC3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC8.82□□□□□ -1
RTN4Q9NQC3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC8.82□□□□□ -1
RTN4Q9NQC3 RPL10P9-201ENST00000522551 645 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC8.82□□□□□ -1
RTN4Q9NQC3 AC090022.1-201ENST00000546569 311 ntBASIC8.82□□□□□ -1
RTN4Q9NQC3 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms