Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TOPBP1Q92547 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TOPBP1Q92547 AC008155.2-201ENST00000464337 397 ntBASIC6.8□□□□□ -1.32
TOPBP1Q92547 RPL29P14-201ENST00000495837 428 ntBASIC6.8□□□□□ -1.32
TOPBP1Q92547 AL031985.2-201ENST00000600955 480 ntBASIC6.8□□□□□ -1.32
TOPBP1Q92547 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TOPBP1Q92547 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
TOPBP1Q92547 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
TOPBP1Q92547 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.79□□□□□ -1.32
TOPBP1Q92547 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TOPBP1Q92547 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.79□□□□□ -1.32
TOPBP1Q92547 RNA5SP22-201ENST00000365393 109 ntBASIC6.79□□□□□ -1.32
TOPBP1Q92547 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.79□□□□□ -1.32
TOPBP1Q92547 HMGB3P19-201ENST00000403971 560 ntBASIC6.79□□□□□ -1.32
TOPBP1Q92547 RPS29P4-201ENST00000414733 161 ntBASIC6.79□□□□□ -1.32
TOPBP1Q92547 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.79□□□□□ -1.32
TOPBP1Q92547 RPS26P4-201ENST00000431743 355 ntBASIC6.79□□□□□ -1.32
TOPBP1Q92547 HMGB3P16-201ENST00000508037 287 ntBASIC6.79□□□□□ -1.32
TOPBP1Q92547 RNA5SP303-201ENST00000516192 130 ntBASIC6.79□□□□□ -1.32
TOPBP1Q92547 RNA5SP179-201ENST00000517284 121 ntBASIC6.79□□□□□ -1.32
TOPBP1Q92547 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TOPBP1Q92547 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.79□□□□□ -1.32
TOPBP1Q92547 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.79□□□□□ -1.32
TOPBP1Q92547 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TOPBP1Q92547 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.79□□□□□ -1.32
TOPBP1Q92547 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
TOPBP1Q92547 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.78□□□□□ -1.32
TOPBP1Q92547 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TOPBP1Q92547 AL035425.3-201ENST00000564206 4996 ntBASIC6.78□□□□□ -1.32
TOPBP1Q92547 SNORD3H-201ENST00000384486 214 ntBASIC6.78□□□□□ -1.32
TOPBP1Q92547 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TOPBP1Q92547 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.78□□□□□ -1.32
TOPBP1Q92547 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TOPBP1Q92547 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.78□□□□□ -1.32
TOPBP1Q92547 AC027176.2-201ENST00000559166 746 ntBASIC6.78□□□□□ -1.32
TOPBP1Q92547 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.78□□□□□ -1.32
TOPBP1Q92547 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC6.78□□□□□ -1.32
TOPBP1Q92547 AP004289.2-201ENST00000444413 1457 ntBASIC6.78□□□□□ -1.32
TOPBP1Q92547 AC140134.1-201ENST00000511830 3544 ntBASIC6.78□□□□□ -1.32
TOPBP1Q92547 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
TOPBP1Q92547 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TOPBP1Q92547 ZNF962P-201ENST00000443465 3140 ntBASIC6.77□□□□□ -1.32
TOPBP1Q92547 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
TOPBP1Q92547 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TOPBP1Q92547 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
TOPBP1Q92547 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.77□□□□□ -1.33
TOPBP1Q92547 AL590609.2-201ENST00000421430 368 ntBASIC6.77□□□□□ -1.33
TOPBP1Q92547 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.77□□□□□ -1.33
TOPBP1Q92547 CYCSP53-201ENST00000455540 265 ntBASIC6.77□□□□□ -1.33
TOPBP1Q92547 AC106707.2-201ENST00000484182 374 ntBASIC6.77□□□□□ -1.33
TOPBP1Q92547 MIR432-201ENST00000606207 94 ntBASIC6.77□□□□□ -1.33
TOPBP1Q92547 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TOPBP1Q92547 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
TOPBP1Q92547 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
TOPBP1Q92547 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.77□□□□□ -1.33
TOPBP1Q92547 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TOPBP1Q92547 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
TOPBP1Q92547 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TOPBP1Q92547 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
TOPBP1Q92547 SUPT16HP1-201ENST00000537175 3133 ntBASIC6.77□□□□□ -1.33
TOPBP1Q92547 MTCO1P12-201ENST00000414273 1543 ntBASIC6.77□□□□□ -1.33
TOPBP1Q92547 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
TOPBP1Q92547 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
TOPBP1Q92547 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
TOPBP1Q92547 PRO1804-201ENST00000623780 2050 ntBASIC6.77□□□□□ -1.33
TOPBP1Q92547 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
TOPBP1Q92547 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TOPBP1Q92547 OR52E6-202ENST00000379946 954 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 RNU2-65P-201ENST00000410162 185 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 Z97055.1-201ENST00000419730 712 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 AC016550.3-201ENST00000515706 767 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 OR8I1P-201ENST00000529291 931 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 PCNP-208ENST00000627393 136 ntTSL 2 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 AC055839.1-201ENST00000634467 498 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TOPBP1Q92547 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TOPBP1Q92547 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 HSPD1P14-201ENST00000432666 1618 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
TOPBP1Q92547 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 Y_RNA.111-201ENST00000363248 100 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 AC096664.2-201ENST00000411843 406 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 UBTFL3-201ENST00000418934 1024 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 HSPD1P21-201ENST00000436541 245 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 UBTFL6-201ENST00000477929 1024 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 HSPD1P15-201ENST00000505573 1122 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 AC090151.1-201ENST00000520784 730 ntBASIC6.76□□□□□ -1.33
TOPBP1Q92547 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.76□□□□□ -1.33
TOPBP1Q92547 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms