Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC016831.4-201ENST00000438302 307 ntBASIC6.01□□□□□ -1.45
SYNE4Q8N205 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 VN1R25P-201ENST00000443385 738 ntBASIC6.01□□□□□ -1.45
SYNE4Q8N205 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNE4Q8N205 PRPF38AP1-201ENST00000451976 933 ntBASIC6.01□□□□□ -1.45
SYNE4Q8N205 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC134050.1-201ENST00000495088 933 ntBASIC6.01□□□□□ -1.45
SYNE4Q8N205 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC116553.2-201ENST00000564203 463 ntBASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 KPNA2P3-201ENST00000584190 848 ntBASIC6.01□□□□□ -1.45
SYNE4Q8N205 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 Z99497.2-201ENST00000603634 310 ntBASIC6.01□□□□□ -1.45
SYNE4Q8N205 AL121932.1-201ENST00000605542 214 ntBASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC011939.3-201ENST00000613686 466 ntBASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNE4Q8N205 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNE4Q8N205 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 NCOA4P2-201ENST00000340589 1813 ntBASIC6.01□□□□□ -1.45
SYNE4Q8N205 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AP005432.1-201ENST00000580891 3485 ntBASIC6.01□□□□□ -1.45
SYNE4Q8N205 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNE4Q8N205 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 AL442639.1-201ENST00000625030 1899 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 TLK1P1-201ENST00000456760 2440 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6□□□□□ -1.45
SYNE4Q8N205 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SYNE4Q8N205 RBPJP2-201ENST00000618187 1444 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6□□□□□ -1.45
SYNE4Q8N205 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6□□□□□ -1.45
SYNE4Q8N205 RNU6-1242P-201ENST00000391052 103 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 AC119751.3-201ENST00000399720 670 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 RPS24P7-201ENST00000416921 246 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 GAPDHP49-201ENST00000421421 961 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6□□□□□ -1.45
SYNE4Q8N205 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6□□□□□ -1.45
SYNE4Q8N205 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC6□□□□□ -1.45
SYNE4Q8N205 AC007563.3-201ENST00000433233 371 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 PTP4A1P3-201ENST00000433661 420 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6□□□□□ -1.45
SYNE4Q8N205 TDGF1P1-201ENST00000445734 527 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 BUD31P2-201ENST00000449374 300 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 OR52E3P-201ENST00000452083 936 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6□□□□□ -1.45
SYNE4Q8N205 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6□□□□□ -1.45
SYNE4Q8N205 AC008494.2-201ENST00000514544 370 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
SYNE4Q8N205 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6□□□□□ -1.45
SYNE4Q8N205 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6□□□□□ -1.45
SYNE4Q8N205 SNX6P1-201ENST00000601728 1224 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 AC125494.2-201ENST00000602431 657 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 AC099785.1-201ENST00000605697 437 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6□□□□□ -1.45
SYNE4Q8N205 AC015922.4-201ENST00000612568 690 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 DLEU1_1.1-201ENST00000618107 190 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6□□□□□ -1.45
SYNE4Q8N205 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6□□□□□ -1.45
SYNE4Q8N205 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 TCP1P3-201ENST00000414406 1498 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6□□□□□ -1.45
SYNE4Q8N205 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 AP001029.2-203ENST00000589795 4910 ntBASIC6□□□□□ -1.45
SYNE4Q8N205 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6□□□□□ -1.45
SYNE4Q8N205 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6□□□□□ -1.45
SYNE4Q8N205 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6□□□□□ -1.45
SYNE4Q8N205 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6□□□□□ -1.45
SYNE4Q8N205 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms